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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plastid 1
  • endoplasmic reticulum 3
  • plasma membrane 5
  • extracellular 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19634 Canola plasma membrane 88.37 99.45
AT3G20520.1 Thale cress plasma membrane 63.77 71.47
Bra001790.1-P Field mustard plasma membrane 67.81 66.27
KRH46279 Soybean extracellular 45.78 51.44
KRG98625 Soybean extracellular 45.41 51.38
KRH46280 Soybean cytosol 16.4 50.95
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 31.09 50.8
PGSC0003DMT400033423 Potato extracellular 8.08 50.38
KRH14296 Soybean endoplasmic reticulum 46.14 50.0
KRH46281 Soybean extracellular, golgi, plasma membrane 46.39 49.8
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 46.02 49.67
KRH73850 Soybean endoplasmic reticulum 45.53 49.4
Solyc12g014570.1.1 Tomato nucleus 45.17 49.13
PGSC0003DMT400033463 Potato extracellular, plasma membrane 44.92 48.74
KRH46282 Soybean extracellular, plasma membrane 44.8 48.09
Bra028979.1-P Field mustard plasma membrane 45.04 48.04
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 41.74 47.56
Solyc07g065120.2.1 Tomato extracellular 43.45 47.14
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 43.7 47.1
GSMUA_Achr8P25690_001 Banana plasma membrane 43.45 46.71
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 43.08 46.5
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 42.23 46.43
PGSC0003DMT400057418 Potato extracellular 42.72 46.35
Bra035244.1-P Field mustard plasma membrane 42.96 46.31
KRG98622 Soybean extracellular, golgi, plasma membrane 42.11 45.93
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 41.37 45.43
TraesCS2D01G332500.1 Wheat golgi 41.37 45.43
HORVU2Hr1G081920.3 Barley plasma membrane 41.25 45.3
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 41.62 45.27
Bra034037.1-P Field mustard extracellular, vacuole 39.66 45.25
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 41.13 45.16
Zm00001d050917_P002 Maize plasma membrane 41.62 45.15
EES10974 Sorghum golgi 41.0 44.73
TraesCS6D01G189300.1 Wheat unclear 40.76 44.58
TraesCS6B01G226700.2 Wheat golgi 40.76 44.58
TraesCS6A01G200600.1 Wheat golgi 40.76 44.52
EES05342 Sorghum plasma membrane 41.0 44.49
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 42.59 44.27
Zm00001d017036_P002 Maize plasma membrane 41.25 43.65
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 40.64 43.4
KXG36695 Sorghum plasma membrane 39.41 41.55
TraesCS7A01G243900.3 Wheat golgi 39.05 41.48
Zm00001d025670_P001 Maize mitochondrion 7.71 41.18
Zm00001d022153_P006 Maize extracellular, mitochondrion 39.05 41.06
Bra035208.1-P Field mustard extracellular, golgi, plastid 13.59 40.66
GSMUA_Achr3P03920_001 Banana cytosol 39.17 40.51
TraesCS7B01G147500.1 Wheat unclear 37.94 40.16
Bra020384.1-P Field mustard extracellular, plasma membrane 37.09 40.08
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 36.6 39.6
Bra020395.1-P Field mustard plasma membrane 35.86 39.22
Zm00001d052875_P001 Maize mitochondrion 37.09 39.05
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 38.31 38.64
GSMUA_AchrUn_... Banana extracellular 7.71 38.41
Bra034040.1-P Field mustard extracellular 6.36 38.24
Bra006785.1-P Field mustard extracellular, plasma membrane 36.23 38.19
Zm00001d031412_P001 Maize extracellular 34.52 37.85
PGSC0003DMT400033459 Potato endoplasmic reticulum 12.0 37.84
OQU80956 Sorghum cytosol 39.66 36.61
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.59 36.11
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 41.37 35.06
Bra015928.1-P Field mustard extracellular, golgi, vacuole 11.51 23.92
Bra003814.1-P Field mustard golgi 10.89 22.76
Bra003813.1-P Field mustard cytosol 11.02 21.84
Bra009316.1-P Field mustard extracellular, vacuole 9.91 21.77
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:1.20.58.1140MapMan:24.2.22Gene3D:3.20.20.190MapMan:5.8.3EnsemblPlantsGene:Bra035774EnsemblPlants:Bra035774.1
EnsemblPlants:Bra035774.1-PGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_dom
InterPro:IPR017946InterPro:IPR030395UniProt:M4F3X4PFAM:PF03009PFAM:PF03647InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF8SUPFAM:SSF51695InterPro:TMEM14TMHMM:TMhelix
UniParc:UPI0002547AF7SEG:seg::::
Description
AT3G20520 (E=2e-296) SVL3 | SVL3 (SHV3-LIKE 3); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase
Coordinates
chrA05:-:17104261..17108901
Molecular Weight (calculated)
90664.1 Da
IEP (calculated)
7.334
GRAVY (calculated)
0.011
Length
817 amino acids
Sequence
(BLAST)
001: MHDFCFTIPY GMLLIGGGFI GYMKKGSITS FAGGAVAGLL LILAGYLSLK AFEKKKNSSI AVVLQTVISA ALTLVMGQRY LLTQKVMPAG LVAGIRMVFL
101: FLINFFILQT ASSSSWQTLH GKPPVVVARG GFSGLLPDSS ENAYKMVKLT TSPDVTLWCD LQLTKDGAGI CFPNLNLDNA SNVKDVYPNH KEWLSVGFTW
201: KELSTVTLEQ GVFSRLQIFD DVSNILRIEE VAKLGTSGLW LNIQHSDFYT QHNLSMRNFV LSISSHMKIN FISSPDISFL KSVKKDVKPT KTKLIFRFLS
301: QDQIDPFTNQ SYASLAKNLT FIKTFSSGIL VPKSYIWPVS SDLYLQPHTS LVTDAHRQGL QVFASEFAND AVSAYNYSYD PTNEYLYFID NGNFSVDGFL
401: SDFPLTPYRA INCFSHLDKK KATKQANITI ISKDGASGDF SGGTDLAYEK AVRDGVDFID CNVQMSKDKI PFCMSSIDLM NSTNVIYTSF RNLSSTVSEI
501: QQGSGIFTFS LTMSEIQTLK PIISNPHRVY GLFRNPRNKN LGKFLTLSEF LLLPNRYSSL SGSLIKIEYA AYLATHQGIS IVDAVLYELK RATSQVLIQS
601: TDKAVLIEFK EKGKMTNEEL VYAVDEDIHD VADSAIKDIK SFAGSIVISK KSVVPYSEGI ARLEKETDIV PRLRSSGLRV YVETFSNEFI TQPYDFFSDP
701: TVEIDYFVRG DPEVDGIITD FPATTSRYTK NPCYSKMEQI RTGELVSLAN REMLSPAEAP YPQLLDSNVT EPPLPEVRIQ PPAPAPAKED VKSKAKAVQV
801: SSTVRAMVVL VSIFIIV
Best Arabidopsis Sequence Match ( AT3G20520.1 )
(BLAST)
001: MACPRVIFLI LITFFILQTA FSSSWQTLSG KPPAVIARGG FSGMFPDSSI QAYQLVNITT SPDVMLWCDL QLTKDGVGIC FPNLKLDNGS NVIRIDPHYK
101: ERFSVDFTWK ELSDVKLAQG VVSRPYIFDD VSSILAIEEV AKLTASGLWL NIQDSAFYAK HNLSMRNSVV SLSRRLKVNF ISSPGISFLK SMKNSVKPTV
201: TKLIFRFLKQ EHIEPFTNQS YGSLAKNLSY IRTFSSGILV PKSYIWPVDS ALYLQPHTSL VTDAHKEGLQ VFASEFANDF VIAYNYSYDP TAEYLSFIDN
301: GNFSVDGFLS DFPVTPYRAI NCFSHVDPKR AKEQAKITII SKNGASGDFP GCTDLAYQRA ASDGADILDC NVQMSKDKIP FCMSSFDLIN STNVIETSFR
401: NLSSVVSEIN PRRSGIYTFS LTMSQIQTLK PTISNLEKDS GLFRNPRNNK AGKFLTLSEF LFLPNRYSSL LGLLIEVENA AYLVEHQGIS VVDAVLDELK
501: RATTQQNKTS ARTILIQSTD KSVLMKFKEK NKMNHDELVY RVDDNIRDVA DSAIKDIKNF AGSIVISKKS VFPYKGFIIL EKETNIASKL KSNGLRVYVE
601: RFSNECVTHA FDFYDDPTLE IDSFVRDVQI DGIITDFPAT TARYRKNKCY GEFGLTTTGE LITFANPMLL PPAEAPYPAL LDSDVTEPPL PEARSQPPAS
701: SPSKAEEKAI EVPFAFIAMA ILVCFFISV
Arabidopsis Description
GDPDL5Glycerophosphodiester phosphodiesterase GDPDL5 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.