Factsheet for VIT_19s0090g01490.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033423	Potato	extracellular	10.7	61.83
KRH73850	Soybean	endoplasmic reticulum	61.29	61.62
KRH46280	Soybean	cytosol	21.4	61.6
KRH14296	Soybean	endoplasmic reticulum	61.16	61.41
Solyc07g065120.2.1	Tomato	extracellular	60.11	60.42
PGSC0003DMT400057418	Potato	extracellular	59.84	60.16
KRH46281	Soybean	extracellular, golgi, plasma membrane	60.37	60.05
PGSC0003DMT400033463	Potato	extracellular, plasma membrane	58.92	59.23
KRH46282	Soybean	extracellular, plasma membrane	59.45	59.13
Solyc12g014570.1.1	Tomato	nucleus	58.39	58.85
KRG98625	Soybean	extracellular	55.35	58.03
KRG98622	Soybean	extracellular, golgi, plasma membrane	57.33	57.94
KRH46279	Soybean	extracellular	55.35	57.63
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	53.63	56.62
CDY46687	Canola	extracellular, plasma membrane, vacuole	53.5	56.49
AT5G55480.1	Thale cress	plasma membrane	57.07	56.4
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.14	56.07
CDX92806	Canola	extracellular, plasma membrane, vacuole	52.84	55.87
CDX94294	Canola	extracellular, plasma membrane, vacuole	55.75	55.75
CDY17323	Canola	plasma membrane	56.27	55.47
AT4G26690.1	Thale cress	extracellular, vacuole	55.61	55.47
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	36.59	55.4
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.35	55.35
CDX89312	Canola	extracellular, plasma membrane, vacuole	55.35	55.35
CDY60410	Canola	extracellular	9.91	55.15
Bra028979.1-P	Field mustard	plasma membrane	55.75	55.09
CDY36746	Canola	plasma membrane	55.48	54.83
GSMUA_Achr8P25690_001	Banana	plasma membrane	54.82	54.61
Bra035244.1-P	Field mustard	plasma membrane	54.43	54.35
CDY61647	Canola	extracellular, plasma membrane	54.16	54.3
CDY12605	Canola	extracellular, vacuole	51.12	54.05
CDY13237	Canola	extracellular, plasma membrane, vacuole	54.16	54.02
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.97	53.97
CDY45656	Canola	extracellular, golgi, plasma membrane	46.37	53.75
AT1G66970.2	Thale cress	plasma membrane	55.61	53.63
Bra034037.1-P	Field mustard	extracellular, vacuole	50.46	53.35
CDY12599	Canola	cytosol	28.4	52.7
CDX86807	Canola	cytosol	15.98	52.61
CDY11996	Canola	plasma membrane	53.63	52.52
Bra034040.1-P	Field mustard	extracellular	9.38	52.21
GSMUA_Achr1P16520_001	Banana	extracellular, plasma membrane	51.26	51.66
HORVU2Hr1G081920.3	Barley	plasma membrane	50.73	51.61
CDY72472	Canola	mitochondrion	25.63	51.6
EES10974	Sorghum	golgi	50.99	51.54
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	50.59	51.48
TraesCS2D01G332500.1	Wheat	golgi	50.59	51.48
Zm00001d050917_P002	Maize	plasma membrane	50.99	51.26
EES05342	Sorghum	plasma membrane	50.99	51.26
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	50.33	51.21
GSMUA_Achr9P12610_001	Banana	endoplasmic reticulum, plasma membrane, plastid	52.97	51.02
CDY29432	Canola	cytosol, peroxisome	40.16	51.01
TraesCS6D01G189300.1	Wheat	unclear	50.33	51.0
TraesCS6A01G200600.1	Wheat	golgi	50.33	50.94
TraesCS6B01G226700.2	Wheat	golgi	50.07	50.74
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	51.12	50.59
PGSC0003DMT400033459	Potato	endoplasmic reticulum	17.31	50.58
CDY19634	Canola	plasma membrane	48.35	50.41
AT3G20520.1	Thale cress	plasma membrane	48.08	49.93
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	17.83	49.45
Zm00001d017036_P002	Maize	plasma membrane	50.2	49.22
CDY58867	Canola	plasma membrane	46.9	49.17
Zm00001d025670_P001	Maize	mitochondrion	9.64	47.71
CDX82242	Canola	cytosol	27.87	47.63
TraesCS7A01G243900.3	Wheat	golgi	48.35	47.59
TraesCS7B01G147500.1	Wheat	unclear	48.35	47.41
CDY42328	Canola	cytosol	16.12	47.29
Bra035774.1-P	Field mustard	plasma membrane	49.67	46.02
KXG36695	Sorghum	plasma membrane	46.76	45.68
CDX86766	Canola	plasma membrane	38.04	45.5
Zm00001d022153_P006	Maize	extracellular, mitochondrion	46.5	45.3
VIT_11s0206g00140.t01	Wine grape	plasma membrane	44.78	45.2
GSMUA_AchrUn_...	Banana	extracellular	9.78	45.12
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	48.22	45.06
GSMUA_Achr3P03920_001	Banana	cytosol	46.63	44.68
CDY36036	Canola	plasma membrane	49.41	44.05
Bra001790.1-P	Field mustard	plasma membrane	48.22	43.66
Zm00001d052875_P001	Maize	mitochondrion	44.25	43.17
Zm00001d031412_P001	Maize	extracellular	41.88	42.55
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	50.86	39.94
OQU80956	Sorghum	cytosol	46.37	39.66
CDX86765	Canola	extracellular, mitochondrion, vacuole	8.32	37.95
AT1G66980.2	Thale cress	plasma membrane	50.86	33.57
Os02t0187300-01	Rice	endoplasmic reticulum, extracellular	1.59	33.33
CDY60415	Canola	plasma membrane	47.56	30.35
CDY14478	Canola	plasma membrane	51.92	29.91
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	11.23	21.52

Protein Annotations

EntrezGene:100246982	wikigene:100246982	Gene3D:3.20.20.190	MapMan:35.1	EMBL:AM459325	ProteinID:CAN61355
ProteinID:CAN61355.1	ProteinID:CBI26719	ProteinID:CBI26719.3	UniProt:D7T860	EMBL:FN595751	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395	EntrezGene:LOC100246982	wikigene:LOC100246982	PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF1	SUPFAM:SSF51695	SignalP:SignalP-noTM
TIGR:TC56961	UniParc:UPI000198561A	ArrayExpress:VIT_19s0090g01490	EnsemblPlantsGene:VIT_19s0090g01490	EnsemblPlants:VIT_19s0090g01490.t01	unigene:Vvi.9862
RefSeq:XP_002276757	RefSeq:XP_002276757.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr19:+:7546664..7555228

Molecular Weight (calculated)

82315.0 Da

IEP (calculated)

5.181

GRAVY (calculated)

0.037

Length

757 amino acids

Sequence
(BLAST)

001: MSKLRQVILL FLLHSVALVS AQGSTNGTSS WQTLNGNAPL VIARGGFSGL FPDSSSAAYS LALMTSLSNV VLWCDVQLTK DGAGICFPDM KLENASDISI
101: VFKNRNNVYL VNGVSTPGWF SVDFTLTDLE TVALNQGVYS RSGRFDGNLF PILTVQEMVK LIRPPGLWLN LQHDVFYTKH NLSMRNFVLS VSKSVIVDYI
201: SSPEVAFLRG VSQRFKATKT KLIFRFLEKE ETDPSTNQTY GSLLNNLTFI KTFASGILVP KGYIWPVNKN SYLESSTLVV QNAHKEGLEV FGSDFINDIP
301: FSYNYSYDPI AEVLNFIDND AFSVDGVLSD FPITPSAAID CFAHIGKNAS GQEKPLIISY NGASGDYPSC TDLAYTKAIS DGVDVLDCNV QMTKDGTPIC
401: LSSINLMDST KVAQTPFSTF TTTITELQKG SGIFTFNLTW EDIRSLTPAI SNPYSTFRLS RNPAAKTAGK LVSLSDFLSI AKEANSLSGG VLIGIEHAAF
501: LVKVGLSVTD AVLDALSKAG YDNVTTPRVM IQSTNSSVLK EFKEKKKNYE LVYRVDENIR DASDATIEDI KKFATSVVIS KDSIYPENKA FITGATDIVS
601: RLKKNNLPVY VQRFDNEFIS QAWDFFSDAT VEINSFVTGA GIDGVITSFP QTAASYRKNR CLKYKNAPSY MSPVQPGSLM QVITSDDMPP ALAPYPVLTE
701: SDVAEPPLQE VAPATPTSST NAGTTAPAPT SPNGQPRIAT CIVLSNLAVL LVAVLLL

Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)

001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL

Arabidopsis Description

GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.