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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86807 Canola cytosol 29.51 97.39
CDY72472 Canola mitochondrion 43.61 88.03
CDY61647 Canola extracellular, plasma membrane 85.9 86.36
CDY60410 Canola extracellular 13.97 77.94
CDY12605 Canola extracellular, vacuole 73.12 77.51
CDY12601 Canola extracellular 13.44 75.0
CDY46687 Canola extracellular, plasma membrane, vacuole 70.75 74.9
AT4G26690.1 Thale cress extracellular, vacuole 74.84 74.84
CDX94294 Canola extracellular, plasma membrane, vacuole 74.31 74.5
CDX92806 Canola extracellular, plasma membrane, vacuole 70.22 74.44
CDX89312 Canola extracellular, plasma membrane, vacuole 73.91 74.11
CDY42328 Canola cytosol 24.51 72.09
CDY12599 Canola cytosol 38.74 72.06
CDY17323 Canola plasma membrane 67.33 66.54
CDY45656 Canola extracellular, golgi, plasma membrane 56.79 66.0
CDY36746 Canola plasma membrane 64.16 63.58
CDY11996 Canola plasma membrane 61.79 60.67
CDY71959 Canola extracellular, plastid, vacuole 25.82 59.76
PGSC0003DMT400033423 Potato extracellular 9.88 57.25
CDY58867 Canola plasma membrane 52.83 55.54
Solyc12g014570.1.1 Tomato nucleus 53.75 54.33
KRH46279 Soybean extracellular 51.91 54.2
PGSC0003DMT400057418 Potato extracellular 53.75 54.18
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 54.02 54.16
KRG98625 Soybean extracellular 51.52 54.16
KRH73850 Soybean endoplasmic reticulum 53.62 54.05
Solyc07g065120.2.1 Tomato extracellular 53.62 54.05
KRH14296 Soybean endoplasmic reticulum 53.23 53.58
CDX86766 Canola plasma membrane 44.53 53.4
PGSC0003DMT400033463 Potato extracellular, plasma membrane 52.96 53.39
KRH46281 Soybean extracellular, golgi, plasma membrane 52.44 52.3
KRH46282 Soybean extracellular, plasma membrane 51.25 51.12
KRH46280 Soybean cytosol 17.39 50.19
KRG98622 Soybean extracellular, golgi, plasma membrane 49.28 49.93
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.86 49.42
GSMUA_Achr8P25690_001 Banana plasma membrane 48.75 48.68
CDY29432 Canola cytosol, peroxisome 38.08 48.49
CDX82242 Canola cytosol 27.93 47.86
HORVU2Hr1G081920.3 Barley plasma membrane 46.9 47.85
TraesCS2D01G332500.1 Wheat golgi 46.9 47.85
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 46.77 47.72
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 46.77 47.72
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 47.17 47.67
TraesCS6A01G200600.1 Wheat golgi 46.77 47.46
CDY19634 Canola plasma membrane 45.32 47.38
EES05342 Sorghum plasma membrane 46.9 47.28
TraesCS6B01G226700.2 Wheat golgi 46.51 47.26
TraesCS6D01G189300.1 Wheat unclear 46.51 47.26
EES10974 Sorghum golgi 46.51 47.13
GSMUA_AchrUn_... Banana extracellular 10.14 46.95
Zm00001d050917_P002 Maize plasma membrane 46.51 46.88
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 48.48 46.82
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 47.04 46.67
CDY14478 Canola plasma membrane 79.18 45.74
Zm00001d017036_P002 Maize plasma membrane 46.25 45.47
CDY32720 Canola extracellular, plastid, vacuole 44.8 45.21
Zm00001d025670_P001 Maize mitochondrion 9.09 45.1
CDY43885 Canola extracellular, golgi, plasma membrane 44.53 45.01
TraesCS7A01G243900.3 Wheat golgi 45.59 44.99
CDY02800 Canola extracellular, plasma membrane, plastid 44.14 44.79
CDY32730 Canola plasma membrane 43.35 44.16
CDY02788 Canola plasma membrane 43.35 44.16
TraesCS7B01G147500.1 Wheat unclear 44.4 43.65
KXG36695 Sorghum plasma membrane 44.53 43.61
Zm00001d052875_P001 Maize mitochondrion 44.53 43.56
CDY11831 Canola extracellular, vacuole 32.41 43.46
CDX88656 Canola plasma membrane 44.27 43.35
Zm00001d031412_P001 Maize extracellular 41.77 42.55
Zm00001d022153_P006 Maize extracellular, mitochondrion 43.48 42.47
GSMUA_Achr3P03920_001 Banana cytosol 44.14 42.41
CDY60415 Canola plasma membrane 66.01 42.24
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 44.53 41.73
CDY36036 Canola plasma membrane 45.85 40.99
CDX71386 Canola extracellular 10.01 40.21
OQU80956 Sorghum cytosol 45.32 38.87
CDX86765 Canola extracellular, mitochondrion, vacuole 8.43 38.55
CDY11832 Canola cytosol, peroxisome, plastid 7.64 37.91
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.71 36.11
CDY11071 Canola extracellular, golgi 11.86 23.02
CDX68196 Canola golgi 11.59 22.17
CDX73068 Canola extracellular 11.33 21.77
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 11.99 21.67
CDX68195 Canola peroxisome 11.46 21.12
CDX85814 Canola extracellular 5.4 20.92
CDX69980 Canola extracellular, golgi, vacuole 10.14 20.7
CDX99041 Canola extracellular 10.14 20.64
CDX85815 Canola mitochondrion 7.25 19.03
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078FJQ7UniProt:A0A078FJQ7EnsemblPlants:CDY13237ProteinID:CDY13237
ProteinID:CDY13237.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00071149001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
SignalP:SignalP-noTMUniParc:UPI0004EF2B79SEG:seg:::
Description
BnaC09g24190DBnaC09g24190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJQ7]
Coordinates
chrLK032033:+:8752..12147
Molecular Weight (calculated)
83128.5 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.054
Length
759 amino acids
Sequence
(BLAST)
001: MPTSTVLLCC VVLIQLFAGQ TDARSSSPWQ TLSGGAPLVI ARGGFSGLFP DSSSAAYGFA VQTSVPGAVL WCDVQLTKDG AAICFPDLKL NNASTVEYFY
101: PNRQKSYPVN GVSTQGWFTI DFSLSDLSNV YLLRGILSRT EKFDGRYPIL TVEYVTTQIK PESFWLNVQH DAFYEQQNLS MSNFLISASR IVSINYISSP
201: EVNFFTKIAG RLRRNGPIYV FQFLRKEDIE PTTNRTYGSI LSNLTFVKTF ASGILVPKSY ILPLDDKQYL VPPPPKSLVQ DAHEAGLQVY VSGFANDIDI
301: AHDYSSDPVS EYLSFVDNGN FSVDGVLSDF PLTASSSIDC FSHLGENAIK QVDFLVISKN GASGDYPGCT DLAYDKAIKD GADVIDCSVQ MSSDGVPFCS
401: RSIDLSNSTM ISQTPFAQRS TLVPEISSNG GIYTFSLTWA EIRNLTTAIG NPYRSYAMFR NPNKKNSGKL ILLSEFLNLA RNSTSLSGVL ISVENAVYLR
501: EKQGLDVVKA VLDTLTETGY SNGTTKTKVM IQSTNSSVLV EFKKQSKYEA VYKVDEKISD ISDSAIEDIK KCANAVVIGK ESVFSLLDSF ITRQTNVVEK
601: LQKSKLPVYV ELFQNEFVSQ PYDFFSDPTV EINSYILGAG INGTITEFPF TAARYRRNRC LGTQETLPPY MAPVEPGSLL QAVNAIPPAQ APNPVFTDDD
701: VTEPPLPPVA AKSPTSTPGD SFTNAQAPRP SGQTRLTLSL RFSVFASLLL LWISSPLCS
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.