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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX71386 Canola extracellular 30.04 89.95
CDX88656 Canola plasma membrane 89.58 65.42
CDY32730 Canola plasma membrane 82.16 62.42
CDY02788 Canola plasma membrane 81.63 62.01
CDY43885 Canola extracellular, golgi, plasma membrane 80.21 60.45
CDY02800 Canola extracellular, plasma membrane, plastid 73.85 55.88
CDY32720 Canola extracellular, plastid, vacuole 73.5 55.32
CDY72472 Canola mitochondrion 31.1 46.81
VIT_11s0206g00140.t01 Wine grape plasma membrane 57.07 43.07
GSMUA_Achr4P09430_001 Banana extracellular 51.94 42.73
CDY71959 Canola extracellular, plastid, vacuole 24.56 42.38
CDY60410 Canola extracellular 9.54 39.71
CDY12601 Canola extracellular 9.36 38.97
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, peroxisome 38.87 38.66
KRH20083 Soybean plasma membrane 50.0 37.04
KRH03081 Soybean extracellular, plasma membrane 49.12 36.39
PGSC0003DMT400008464 Potato cytosol 44.35 34.01
PGSC0003DMT400008461 Potato cytosol 45.94 33.81
CDY61647 Canola extracellular, plasma membrane 44.7 33.51
Solyc02g014490.2.1 Tomato unclear 42.4 33.24
Solyc02g014530.2.1 Tomato unclear 46.11 32.83
CDY13237 Canola extracellular, plasma membrane, vacuole 43.46 32.41
CDX89312 Canola extracellular, plasma membrane, vacuole 43.11 32.23
CDX94294 Canola extracellular, plasma membrane, vacuole 42.93 32.1
CDY12605 Canola extracellular, vacuole 40.46 31.98
CDY17323 Canola plasma membrane 42.93 31.64
CDY46687 Canola extracellular, plasma membrane, vacuole 39.58 31.24
CDX92806 Canola extracellular, plasma membrane, vacuole 39.4 31.15
CDY19634 Canola plasma membrane 39.4 30.72
CDY45656 Canola extracellular, golgi, plasma membrane 35.34 30.63
CDY36746 Canola plasma membrane 40.64 30.03
CDY11996 Canola plasma membrane 40.81 29.88
CDY29432 Canola cytosol, peroxisome 30.92 29.36
CDY58867 Canola plasma membrane 35.69 27.98
CDY36036 Canola plasma membrane 40.64 27.09
CDX86765 Canola extracellular, mitochondrion, vacuole 7.77 26.51
CDX86766 Canola plasma membrane 26.86 24.01
CDY12599 Canola cytosol 16.78 23.28
CDX82242 Canola cytosol 17.84 22.8
CDX85814 Canola extracellular 6.89 19.9
CDY14478 Canola plasma membrane 43.82 18.87
CDY60415 Canola plasma membrane 37.63 17.96
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 8.83 11.9
CDX69980 Canola extracellular, golgi, vacuole 7.77 11.83
CDY11071 Canola extracellular, golgi 7.95 11.51
CDX73068 Canola extracellular 7.95 11.39
CDX68196 Canola golgi 7.95 11.34
CDX99041 Canola extracellular 7.42 11.26
CDX68195 Canola peroxisome 7.95 10.92
CDY42328 Canola cytosol 3.89 8.53
CDY11832 Canola cytosol, peroxisome, plastid 2.3 8.5
CDX85815 Canola mitochondrion 2.12 4.15
CDX86807 Canola cytosol 1.06 2.61
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078FEX4UniProt:A0A078FEX4EnsemblPlants:CDY11831ProteinID:CDY11831
ProteinID:CDY11831.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00060655001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF3SUPFAM:SSF51695
SignalP:SignalP-noTMUniParc:UPI0004EEB766SEG:seg:::
Description
BnaC03g12570DBnaC03g12570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEX4]
Coordinates
chrLK032015:+:8263..11399
Molecular Weight (calculated)
61950.7 Da
IEP (calculated)
7.982
GRAVY (calculated)
-0.117
Length
566 amino acids
Sequence
(BLAST)
001: MLRSFIIFSL FLHSCVAAPK TPAAVAAVPA KKWLTLNGQE PGVVARGGFS GLFPESSASA NAFAISTSSP GLTMLCNLQM TKDGVGICLP DIRLDNSTTI
101: STLFPKAQKT YKVNGQDLKG WFALDYSADT IFSNVSLVQN IFSRPSIFDG QMPISAVEDV LGTKPPKFWL SVQYDSFYME HKLSAAEYLK TLRFRGITFI
201: SSPEIAFLKS IGMDAGMSKT KLIFEFKDPE AIEPTTNKKY SEILLDLAAI KAFASGVLVP KDYIWPLDSA NYLKPASTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGFITD FPPTASQAIS CLSHQQGNLP KANHALVITH NGASGDYPGC TDMAYQKAVN DGADVIDCSV QMSKDGIAFC
401: HDSADLTAST TAMTTFISRA TSVPEIQPTN GIFSFDLTWA EIQSLKPQIL SPFLTKGGFQ RNPANKNAGK FMTLVDFLEF SKEKAVTGVL INIEAKCCLS
501: SLKERSRNSR YSPVCDHQVH TRQATNPKSV DSVRRQFCSV QFRSCSSLHK SLDHRQGNRR CSQTIH
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.