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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 1
  • golgi 4
  • mitochondrion 1
  • extracellular 4
  • plasma membrane 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:golgi
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG98502
KRG98507
KRH46360
KRH46364

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G58170.1 KRG98502 AT4G26630.1 25387881
AT5G58170.1 KRG98507 AT4G26630.1 25387881
AT5G58170.1 KRH46360 AT4G26630.1 25387881
AT5G58170.1 KRH46364 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH20083 Soybean plasma membrane 90.18 90.18
VIT_11s0206g00140.t01 Wine grape plasma membrane 54.71 55.73
CDY32730 Canola plasma membrane 51.96 53.29
CDY02788 Canola plasma membrane 51.83 53.15
AT5G58050.1 Thale cress extracellular, plasma membrane 52.36 53.12
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 52.23 52.85
Bra020395.1-P Field mustard plasma membrane 51.57 52.74
CDY43885 Canola extracellular, golgi, plasma membrane 51.18 52.06
AT5G58170.1 Thale cress extracellular, plasma membrane 50.92 51.87
GSMUA_Achr4P09430_001 Banana extracellular 46.6 51.74
CDY32720 Canola extracellular, plastid, vacuole 50.92 51.73
Bra020384.1-P Field mustard extracellular, plasma membrane 50.92 51.45
CDY02800 Canola extracellular, plasma membrane, plastid 50.26 51.34
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, peroxisome 38.22 51.32
CDX88656 Canola plasma membrane 51.44 50.71
Bra006785.1-P Field mustard extracellular, plasma membrane 51.31 50.58
Zm00001d015609_P002 Maize plasma membrane 49.35 49.54
KXG29647 Sorghum extracellular, plasma membrane 48.82 49.54
CDY11831 Canola extracellular, vacuole 36.39 49.12
TraesCS6A01G174100.1 Wheat extracellular, plasma membrane, vacuole 47.64 48.6
CDY11832 Canola cytosol, peroxisome, plastid 9.69 48.37
TraesCS6D01G163200.1 Wheat extracellular, plasma membrane 47.38 48.33
TraesCS6B01G202700.1 Wheat extracellular, plasma membrane 47.38 48.33
Os02t0187400-01 Rice plasma membrane 43.46 47.23
EER90089 Sorghum extracellular, plasma membrane 46.2 46.39
TraesCS1A01G353200.1 Wheat extracellular, plasma membrane 44.24 44.42
Solyc02g014490.2.1 Tomato unclear 41.88 44.32
TraesCS1D01G357000.1 Wheat extracellular, plasma membrane 43.98 44.15
PGSC0003DMT400008464 Potato cytosol 42.54 44.04
TraesCS1B01G368600.1 Wheat extracellular, plasma membrane 43.72 43.89
PGSC0003DMT400008461 Potato cytosol 43.98 43.69
CDX71386 Canola extracellular 10.73 43.39
KRH46280 Soybean cytosol 14.92 43.35
Solyc02g014530.2.1 Tomato unclear 44.63 42.89
KRH14296 Soybean endoplasmic reticulum 41.23 41.78
KRH73850 Soybean endoplasmic reticulum 40.97 41.57
HORVU1Hr1G080970.22 Barley extracellular, plasma membrane 43.59 41.01
KRG98625 Soybean extracellular 38.61 40.86
KRH46279 Soybean extracellular 38.74 40.72
KRH46281 Soybean extracellular, golgi, plasma membrane 39.27 39.42
KRH46282 Soybean extracellular, plasma membrane 38.74 38.9
KRG98622 Soybean extracellular, golgi, plasma membrane 37.96 38.72
KRH56805 Soybean nucleus 11.26 21.94
KRH03139 Soybean extracellular, golgi 11.13 21.91
Protein Annotations
EntrezGene:100802517Gene3D:3.20.20.190MapMan:35.1EMBL:ACUP02010335EnsemblPlantsGene:GLYMA_17G075700GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395
UniProt:K7MKF0EnsemblPlants:KRH03081ProteinID:KRH03081ProteinID:KRH03081.1PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF3SUPFAM:SSF51695SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI000233E523SEG:seg::::
Description
hypothetical protein
Coordinates
chr17:-:5927715..5932238
Molecular Weight (calculated)
82410.9 Da
IEP (calculated)
5.784
GRAVY (calculated)
0.009
Length
764 amino acids
Sequence
(BLAST)
001: MNISVWEKNK MFRSLFLIPL LLHTILAKKT ALPNLPTPQV PPQQWSTLSG NEPLVIARGG FSGLFPEGSP DAIGLAQGIS VFLCNLQLTK DGGAFCVTGT
101: TLDNTTIISL VDPKEKTYNV DGKDVQGHFS FDYTGLLIEQ NVSMTQAIYS RPNFYDGASP VLNLDALLSG KSPPRTWLNV QNAALYIENG VQVVDIVLEL
201: LKVYQIEFVS SSDIGFLKSI SGKSNKATKV VFKLLNNNKV EPSTKKPYGS IVKDLVTIKS FASGIMVPKE YIWPVKPDKY LGLPTTLVAD AHKSGLEVYA
301: SGFANDFFTS YSYDYDPVAE YLQFVDRGDS VDGVVTDFPA TASNAIACFA HNNTLPKKAP TLIISNNGAS GVYPGSSDLA YQKAIDDGAD IIDCSVQMTK
401: DGIAFCSEST DLTSDTTAMP KFMSRSSSVP EIQPKSGIFS FDLTWKEIQT LKPQMVSKSS DFLRNPANKT SGKIVTLSEF LELAKAKAVP GILVNIQNAP
501: YLASKKGLDI VDAVSIALIN ATFDKQTKQQ VLIQSDDSSV LSRFKDIPSY KRVMLLIDKM GDVPKQSAEE IKKHADAVNL PKTSILKISN AILVGMTSIV
601: QELKDANLTV FVHSLKNEYT TLAFDYWSDP NVEIATYIQI AKVDGIVTDF PATASRFMRS PCSIPTNDPS ILPAKPGDLL NTIPTEIQPP ALAPLPPLEV
701: ANVVDPPLPA VTKSSKNSTV AEPADAGATP ASPPLPSGAR ANVASSGLSI ITILVFAMLF AAHQ
Best Arabidopsis Sequence Match ( AT5G58050.1 )
(BLAST)
001: MLRFFILFSL FLHSSVAAPK TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSISA NDLAIGTSSP GFTMLCNLQM TKDGVGLCLS DIRLDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVIDYDADT IFNKVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLRFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAID DGADIIDCSV QMSKDGIAFC
401: HDAADLSAST TARTTFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF TTLADFLELG KAKAVTGVLI NIQNAAYLAS
501: KKGLGVVDVV KSALTNSTLD KQSTQKVLIQ SDDSSVLSSF EAVPPYTRVL SIDKEIGDAP KTSIEEIKKH ADAVNLLRTS LITVSQSFAT GKTNVVEEMH
601: KANISVYVSV LRNEYIAIAF DYFSDPTIEL ATFIAGRGVD GVITEFPATA TRYLRSPCSD LNKDQPYAIL PADAGALLTV ADKEAQLPAI PPNPPLDAKD
701: VIDPPLPPVA KLASNGTEGG PPQTPPRSGT VAIAANLSLS LLAMMALGLL YTA
Arabidopsis Description
GDPDL6Glycerophosphodiester phosphodiesterase GDPDL6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGT9]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.