CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32720	Canola	extracellular, plastid, vacuole	97.06	96.54
CDX71386	Canola	extracellular	20.59	81.48
CDY43885	Canola	extracellular, golgi, plasma membrane	81.02	80.69
CDY32730	Canola	plasma membrane	80.21	80.54
CDY02788	Canola	plasma membrane	79.95	80.27
CDY11832	Canola	cytosol, peroxisome, plastid	16.18	79.08
CDX88656	Canola	plasma membrane	79.28	76.52
CDY11831	Canola	extracellular, vacuole	55.88	73.85
VIT_11s0206g00140.t01	Wine grape	plasma membrane	58.82	58.67
GSMUA_Achr4P09430_001	Banana	extracellular	51.87	56.4
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, peroxisome	42.65	56.06
KRH20083	Soybean	plasma membrane	52.14	51.05
KRH03081	Soybean	extracellular, plasma membrane	51.34	50.26
PGSC0003DMT400008464	Potato	cytosol	45.19	45.8
CDY72472	Canola	mitochondrion	22.99	45.74
Solyc02g014490.2.1	Tomato	unclear	43.85	45.43
CDY61647	Canola	extracellular, plasma membrane	45.32	44.9
CDX94294	Canola	extracellular, plasma membrane, vacuole	45.19	44.65
PGSC0003DMT400008461	Potato	cytosol	45.86	44.6
CDX89312	Canola	extracellular, plasma membrane, vacuole	45.05	44.52
CDY12605	Canola	extracellular, vacuole	42.51	44.41
Solyc02g014530.2.1	Tomato	unclear	47.06	44.28
CDY13237	Canola	extracellular, plasma membrane, vacuole	44.79	44.14
CDY46687	Canola	extracellular, plasma membrane, vacuole	41.98	43.79
CDY45656	Canola	extracellular, golgi, plasma membrane	37.97	43.49
CDX92806	Canola	extracellular, plasma membrane, vacuole	41.31	43.16
CDY17323	Canola	plasma membrane	43.18	42.06
CDY12599	Canola	cytosol	22.59	41.42
CDY29432	Canola	cytosol, peroxisome	32.75	41.11
CDY19634	Canola	plasma membrane	39.71	40.91
CDY36746	Canola	plasma membrane	41.44	40.47
CDY71959	Canola	extracellular, plastid, vacuole	17.51	39.94
CDX86807	Canola	cytosol	12.03	39.13
CDY11996	Canola	plasma membrane	40.24	38.94
CDY58867	Canola	plasma membrane	37.43	38.78
CDX82242	Canola	cytosol	22.06	37.25
CDY42328	Canola	cytosol	12.83	37.21
CDX86766	Canola	plasma membrane	31.15	36.81
CDY60410	Canola	extracellular	6.68	36.76
CDY12601	Canola	extracellular	6.55	36.03
CDY36036	Canola	plasma membrane	39.04	34.39
CDX86765	Canola	extracellular, mitochondrion, vacuole	5.61	25.3
CDY60415	Canola	plasma membrane	38.77	24.45
CDY14478	Canola	plasma membrane	42.65	24.28
CDY11071	Canola	extracellular, golgi	11.76	22.51
CDX68196	Canola	golgi	11.76	22.17
CDX68195	Canola	peroxisome	11.9	21.6
CDX73068	Canola	extracellular	11.23	21.27
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	11.9	21.19
CDX69980	Canola	extracellular, golgi, vacuole	10.43	20.97
CDX99041	Canola	extracellular	10.03	20.11
CDX85814	Canola	extracellular	5.08	19.39
CDX85815	Canola	mitochondrion	6.68	17.3

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078ELA6	EnsemblPlants:CDY02800	ProteinID:CDY02800	ProteinID:CDY02800.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00114976001	InterPro:IPR017946	InterPro:IPR030395	PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF3	SUPFAM:SSF51695	SignalP:SignalP-noTM
UniParc:UPI0004EE67A3	SEG:seg	:	:	:	:

Description

BnaC02g10890D

Coordinates

chrLK031937:-:514705..517547

Molecular Weight (calculated)

80514.4 Da

IEP (calculated)

7.407

GRAVY (calculated)

-0.000

Length

748 amino acids

Sequence
(BLAST)

001: MLRFLILFSL LIHSCVAPPK TKAAAGTLPA KKWLTLSGKE PAVVARGGFS GLFPESSATA NDLAISSSSP DLTMLCNLQL TKDGAGFCLS DIRLDNSTTI
101: STFFPKGQKT YKVYGQNLKG WFALDYSADT IFSNVSLVQN IFSRPSIFDG QMAIAAVEDV LDTKPPKFWL SVQYDAFYME HKLSPAEYIR SLRFNGINVI
201: SSPEIGFLKS IGKDARRAKT KLIFEFKDPE ANEPTTNKKY SEILLNLAAI KVFATGIIVP KDYIWPIDSA KYLKPPTTVV TDAHKAGLEI YASGFVNDML
301: TSYNYSYDPS AEYLQFVDNG QFSVDGFISD FPPTASQAIS CFAHQKRDTP KIGKTLVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMTKDGMAFC
401: LDSADLIPTT TAATTLMTRA TSVPEIQSKN GIFSFDLTWA EIQSLKPQIQ SPFLAADGFP RNPKNKNAGK FMTLADFLKF SKAKAVTGVL INIQATSKKG
501: LGIVDAVKSA LTSSKLDKKV LIQSDDSSVL DSFKAAPQYT RVLSIDKEIG DAPKPTIEEI KKHADAVNVL RSSLVTISQS FATGKTKVVE AMHKGNISVY
601: VSVLRNEYLS ITFDYFSDPT VELATFIAGN GVDGVITEFP ATATRYLRSP CSDLYRELPF AILPAKAGTL VSVASKEAQP PASAPNPPLD AKDVIDPPLP
701: PVANLATNNA SGGDPPASLR SGTIATTANL SLSLMAMLAL GLLLCAGA

Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)

001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL

Arabidopsis Description

SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.