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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:extracellular
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86765 Canola extracellular, mitochondrion, vacuole 24.01 91.57
CDY58867 Canola plasma membrane 87.52 76.73
CDX86807 Canola cytosol 20.85 57.39
CDY42328 Canola cytosol 23.38 57.36
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 85.94 56.43
CDY36746 Canola plasma membrane 67.93 56.14
CDY17323 Canola plasma membrane 66.98 55.21
CDY12599 Canola cytosol 35.39 54.9
PGSC0003DMT400033423 Potato extracellular 11.06 53.44
AT5G55480.1 Thale cress plasma membrane 64.61 53.39
CDY11996 Canola plasma membrane 64.45 52.78
CDY45656 Canola extracellular, golgi, plasma membrane 54.03 52.37
CDY60410 Canola extracellular 10.74 50.0
CDY46687 Canola extracellular, plasma membrane, vacuole 56.08 49.51
CDX92806 Canola extracellular, plasma membrane, vacuole 55.61 49.16
CDX94294 Canola extracellular, plasma membrane, vacuole 56.4 47.16
CDX89312 Canola extracellular, plasma membrane, vacuole 56.08 46.9
CDY12601 Canola extracellular 9.95 46.32
CDY61647 Canola extracellular, plasma membrane 54.66 45.83
CDY12605 Canola extracellular, vacuole 50.55 44.69
CDY13237 Canola extracellular, plasma membrane, vacuole 53.4 44.53
CDX82242 Canola cytosol 30.96 44.24
PGSC0003DMT400033459 Potato endoplasmic reticulum 17.22 42.08
KRH46281 Soybean extracellular, golgi, plasma membrane 45.97 38.24
Solyc12g014570.1.1 Tomato nucleus 45.18 38.08
KRH14296 Soybean endoplasmic reticulum 45.34 38.06
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 45.5 38.04
Solyc07g065120.2.1 Tomato extracellular 44.87 37.72
KRH73850 Soybean endoplasmic reticulum 44.87 37.72
PGSC0003DMT400057418 Potato extracellular 44.71 37.58
CDY71959 Canola extracellular, plastid, vacuole 19.43 37.5
PGSC0003DMT400033463 Potato extracellular, plasma membrane 44.55 37.45
KRH46282 Soybean extracellular, plasma membrane 44.23 36.79
KRG98625 Soybean extracellular 41.71 36.57
KRH46279 Soybean extracellular 41.55 36.18
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 2.05 36.11
GSMUA_Achr8P25690_001 Banana plasma membrane 43.29 36.05
CDY11832 Canola cytosol, peroxisome, plastid 8.69 35.95
KRG98622 Soybean extracellular, golgi, plasma membrane 42.5 35.91
CDY72472 Canola mitochondrion 21.17 35.64
HORVU2Hr1G081920.3 Barley plasma membrane 41.07 34.95
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 41.39 34.89
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 40.92 34.81
TraesCS6A01G200600.1 Wheat golgi 41.07 34.76
GSMUA_AchrUn_... Banana extracellular 9.0 34.76
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 40.76 34.68
TraesCS2D01G332500.1 Wheat golgi 40.76 34.68
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 42.97 34.61
TraesCS6D01G189300.1 Wheat unclear 40.76 34.54
TraesCS6B01G226700.2 Wheat golgi 40.6 34.4
EES10974 Sorghum golgi 40.6 34.31
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 41.23 34.12
Zm00001d050917_P002 Maize plasma membrane 40.44 34.0
EES05342 Sorghum plasma membrane 40.13 33.73
CDY29432 Canola cytosol, peroxisome 31.44 33.39
CDY19634 Canola plasma membrane 38.23 33.33
TraesCS7A01G243900.3 Wheat golgi 40.44 33.29
TraesCS7B01G147500.1 Wheat unclear 39.81 32.64
Zm00001d017036_P002 Maize plasma membrane 39.65 32.51
KXG36695 Sorghum plasma membrane 39.02 31.87
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 40.6 31.73
Zm00001d052875_P001 Maize mitochondrion 38.7 31.57
Zm00001d025670_P001 Maize mitochondrion 7.58 31.37
Zm00001d022153_P006 Maize extracellular, mitochondrion 38.39 31.27
CDY32720 Canola extracellular, plastid, vacuole 37.12 31.25
CDY02800 Canola extracellular, plasma membrane, plastid 36.81 31.15
CDY43885 Canola extracellular, golgi, plasma membrane 36.33 30.63
CDY32730 Canola plasma membrane 36.02 30.6
GSMUA_Achr3P03920_001 Banana cytosol 38.07 30.51
CDY02788 Canola plasma membrane 35.86 30.47
CDX88656 Canola plasma membrane 37.28 30.45
CDY36036 Canola plasma membrane 40.76 30.39
Zm00001d031412_P001 Maize extracellular 35.55 30.2
OQU80956 Sorghum cytosol 40.13 28.7
CDY11831 Canola extracellular, vacuole 24.01 26.86
CDY60415 Canola plasma membrane 49.13 26.22
CDY14478 Canola plasma membrane 51.66 24.89
CDX71386 Canola extracellular 6.32 21.16
CDX68196 Canola golgi 13.27 21.16
CDY11071 Canola extracellular, golgi 12.95 20.97
CDX85814 Canola extracellular 6.48 20.92
CDX73068 Canola extracellular 12.95 20.76
CDX69980 Canola extracellular, golgi, vacuole 11.85 20.16
CDX99041 Canola extracellular 11.85 20.11
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 13.11 19.76
CDX68195 Canola peroxisome 12.16 18.69
KRH46280 Soybean cytosol 7.74 18.63
CDX85815 Canola mitochondrion 7.42 16.26
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078DBX9EnsemblPlants:CDX86766ProteinID:CDX86766ProteinID:CDX86766.1
GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152
GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00145489001InterPro:IPR017946InterPro:IPR030395PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI0004EDB78DSEG:seg:::
Description
BnaA09g21560D
Coordinates
chrLK031847:-:523866..526769
Molecular Weight (calculated)
69587.7 Da
IEP (calculated)
6.729
GRAVY (calculated)
0.077
Length
633 amino acids
Sequence
(BLAST)
001: MITSYMQDNP SMFVSRASKF LLSVLVLIQL LPTQLLAQRS KSPWQTLTGE APLVIARGGF SGLFPDSSVT AYSFVSATSV PDAVLWCDVQ LTKDGVGICF
101: PDVTMTGSPL TSPPKISKAC SVSLGYCHGH RHSMTTETLF HQLRTYNIIS NLRGFGLMFS TTLSKTVTID YLSSPELKFF RDIGSRRLLQ AFFYDPLAEY
201: LSFMDNGNFS VDGVVSDFPL TASSATVSPI LEVTQGDFFV ISKNGASGDY PGCSDLAYSK AIEDGADIID CAIQMSSDGI PFCLNSSNLL EGTNVFQSPF
301: INRSSTVPEI APHAGIYSFS LRWSEIKTLR LAMTHPYSLG FNLFRNPREK SSEKIVPLYD FLILANKSSS LVGVLISVEN VAYLRGKQGI DVVKEVLYAF
401: KEACCIDATK RVMIQSSNSP VLVDFKKQSP YEIVYQVEEN VGDIVDSAIE EIKKFADAVV VSRRSVYFFL SGQTHLVEKL HKFNLPVYVK TFRNEFVSQP
501: WDFFSDATVE INTYVAGAGV NGTITEFPLT AARYKRNRCL TRKDHPPYMP LVKPAGLLGF VNHDSPHPAF TADDVTEPPL PPVTFRTPPN IPGPLSTDEK
601: APNSKTRLTP PLLLPALAMA LASLLLLSSL SIL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.