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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12601 Canola extracellular 89.71 89.71
Bra034040.1-P Field mustard extracellular 88.24 88.24
GSMUA_AchrUn_... Banana extracellular 48.53 40.24
Zm00001d025670_P001 Maize mitochondrion 43.38 38.56
CDX86765 Canola extracellular, mitochondrion, vacuole 44.85 36.75
CDY71959 Canola extracellular, plastid, vacuole 65.44 27.13
CDX71386 Canola extracellular 36.03 25.93
KRH46280 Soybean cytosol 28.68 14.83
CDY61647 Canola extracellular, plasma membrane 77.94 14.04
CDY13237 Canola extracellular, plasma membrane, vacuole 77.94 13.97
CDX92806 Canola extracellular, plasma membrane, vacuole 66.18 12.57
CDY12605 Canola extracellular, vacuole 66.18 12.57
CDY46687 Canola extracellular, plasma membrane, vacuole 66.18 12.55
CDX94294 Canola extracellular, plasma membrane, vacuole 69.12 12.42
CDX89312 Canola extracellular, plasma membrane, vacuole 68.38 12.29
CDY17323 Canola plasma membrane 68.38 12.11
CDY36746 Canola plasma membrane 61.03 10.84
CDX86766 Canola plasma membrane 50.0 10.74
PGSC0003DMT400057418 Potato extracellular 56.62 10.23
Solyc07g065120.2.1 Tomato extracellular 56.62 10.23
CDY11996 Canola plasma membrane 58.09 10.22
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 55.15 9.91
Solyc12g014570.1.1 Tomato nucleus 52.94 9.59
PGSC0003DMT400033463 Potato extracellular, plasma membrane 52.94 9.56
CDY11831 Canola extracellular, vacuole 39.71 9.54
KRG98625 Soybean extracellular 49.26 9.28
KRH73850 Soybean endoplasmic reticulum 50.74 9.16
KRH46279 Soybean extracellular 48.53 9.08
CDY60415 Canola plasma membrane 78.68 9.02
KRH14296 Soybean endoplasmic reticulum 49.26 8.89
CDY58867 Canola plasma membrane 47.06 8.86
AT1G66980.2 Thale cress plasma membrane 74.26 8.81
KRH46281 Soybean extracellular, golgi, plasma membrane 49.26 8.8
KRH46282 Soybean extracellular, plasma membrane 47.79 8.54
HORVU2Hr1G081920.3 Barley plasma membrane 45.59 8.33
TraesCS6B01G226700.2 Wheat golgi 45.59 8.3
TraesCS6D01G189300.1 Wheat unclear 45.59 8.3
TraesCS6A01G200600.1 Wheat golgi 45.59 8.29
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 44.85 8.2
TraesCS2D01G332500.1 Wheat golgi 44.85 8.2
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 44.12 8.06
GSMUA_Achr8P25690_001 Banana plasma membrane 44.85 8.03
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 45.59 7.89
EES10974 Sorghum golgi 43.38 7.88
Zm00001d017036_P002 Maize plasma membrane 44.12 7.77
CDY14478 Canola plasma membrane 75.0 7.76
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 43.38 7.71
Zm00001d050917_P002 Maize plasma membrane 42.65 7.7
EES05342 Sorghum plasma membrane 42.65 7.7
Zm00001d031412_P001 Maize extracellular 41.91 7.65
TraesCS7B01G147500.1 Wheat unclear 42.65 7.51
KRG98622 Soybean extracellular, golgi, plasma membrane 41.18 7.48
GSMUA_Achr3P03920_001 Banana cytosol 43.38 7.47
TraesCS7A01G243900.3 Wheat golgi 41.91 7.41
KXG36695 Sorghum plasma membrane 41.18 7.23
Zm00001d022153_P006 Maize extracellular, mitochondrion 41.18 7.21
CDY36036 Canola plasma membrane 44.85 7.18
CDY19634 Canola plasma membrane 38.24 7.16
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 42.65 7.16
CDX88656 Canola plasma membrane 40.44 7.1
Zm00001d052875_P001 Maize mitochondrion 39.71 6.96
CDY43885 Canola extracellular, golgi, plasma membrane 38.24 6.92
CDY32720 Canola extracellular, plastid, vacuole 38.24 6.91
OQU80956 Sorghum cytosol 44.85 6.89
CDY02788 Canola plasma membrane 37.5 6.85
CDY32730 Canola plasma membrane 37.5 6.85
CDY02800 Canola extracellular, plasma membrane, plastid 36.76 6.68
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 36.76 6.66
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.47 5.56
CDY72472 Canola mitochondrion 12.5 4.52
PGSC0003DMT400033423 Potato extracellular 1.47 1.53
CDY45656 Canola extracellular, golgi, plasma membrane 5.88 1.23
CDY42328 Canola cytosol 1.47 0.78
PGSC0003DMT400033459 Potato endoplasmic reticulum 1.47 0.77
CDX85814 Canola extracellular 0.74 0.51
CDY12599 Canola cytosol 1.47 0.49
CDX82242 Canola cytosol 1.47 0.45
CDY29432 Canola cytosol, peroxisome 1.47 0.34
CDX68196 Canola golgi 0.74 0.25
CDX73068 Canola extracellular 0.0 0.0
CDX68195 Canola peroxisome 0.0 0.0
CDX85815 Canola mitochondrion 0.0 0.0
CDX86807 Canola cytosol 0.0 0.0
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 0.0 0.0
CDX99041 Canola extracellular 0.0 0.0
CDY11071 Canola extracellular, golgi 0.0 0.0
CDY11832 Canola cytosol, peroxisome, plastid 0.0 0.0
CDX69980 Canola extracellular, golgi, vacuole 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078J743UniProt:A0A078J743EnsemblPlants:CDY60410ProteinID:CDY60410
ProteinID:CDY60410.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00029574001InterPro:IPR017946InterPro:IPR030395
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTM
UniParc:UPI0004EE2469:::::
Description
BnaC02g45300DBnaC02g45300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J743]
Coordinates
chrLK033878:-:258..1773
Molecular Weight (calculated)
14806.8 Da
IEP (calculated)
8.830
GRAVY (calculated)
0.099
Length
136 amino acids
Sequence
(BLAST)
001: MRASTVLLSS VVLIQLFAAQ IDAKRSKSPW QTLSGDAPLV IARGGFSGLF PDSSIDAYNN AMQTSVAGAV LWCDVQLTKD GHGICFPDLK LNNASSIGYV
101: YPNRQKSYPV NGVTIQGWFT IDFALRDLKN VSCKYL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.