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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050917_P002 Maize plasma membrane 86.66 88.84
EES05342 Sorghum plasma membrane 86.4 88.58
Os02t0588500-02 Rice extracellular 73.19 75.43
TraesCS6A01G200600.1 Wheat golgi 70.21 72.46
TraesCS6B01G226700.2 Wheat golgi 70.08 72.42
TraesCS6D01G189300.1 Wheat unclear 69.82 72.16
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 70.47 71.11
Zm00001d025670_P001 Maize mitochondrion 12.95 65.36
GSMUA_Achr8P25690_001 Banana plasma membrane 57.9 58.82
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 58.81 57.76
PGSC0003DMT400033423 Potato extracellular 9.07 53.44
GSMUA_Achr3P03920_001 Banana cytosol 53.76 52.53
KRH73850 Soybean endoplasmic reticulum 50.26 51.53
KRH14296 Soybean endoplasmic reticulum 50.0 51.19
Zm00001d022153_P006 Maize extracellular, mitochondrion 51.04 50.71
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 32.64 50.4
Solyc07g065120.2.1 Tomato extracellular 49.09 50.33
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 49.22 50.2
KRH46280 Soybean cytosol 17.1 50.19
PGSC0003DMT400057418 Potato extracellular 48.83 50.07
KRH46281 Soybean extracellular, golgi, plasma membrane 49.09 49.8
PGSC0003DMT400033463 Potato extracellular, plasma membrane 48.58 49.8
Zm00001d052875_P001 Maize mitochondrion 50.0 49.74
CDY71959 Canola extracellular, plastid, vacuole 21.11 49.7
Solyc12g014570.1.1 Tomato nucleus 48.32 49.67
AT4G26690.1 Thale cress extracellular, vacuole 48.58 49.41
KRH46282 Soybean extracellular, plasma membrane 48.58 49.28
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 48.19 49.08
AT5G55480.1 Thale cress plasma membrane 48.32 48.69
CDX94294 Canola extracellular, plasma membrane, vacuole 47.41 48.35
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 47.41 48.35
CDY17323 Canola plasma membrane 48.06 48.31
CDX89312 Canola extracellular, plasma membrane, vacuole 47.28 48.22
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 46.11 47.91
CDY36746 Canola plasma membrane 47.54 47.91
CDY72472 Canola mitochondrion 23.32 47.87
Zm00001d031412_P001 Maize extracellular 46.11 47.79
Bra028979.1-P Field mustard plasma membrane 47.41 47.78
KRG98622 Soybean extracellular, golgi, plasma membrane 45.85 47.26
KRH46279 Soybean extracellular 44.43 47.18
CDY45656 Canola extracellular, golgi, plasma membrane 39.9 47.17
CDY61647 Canola extracellular, plasma membrane 46.11 47.15
KRG98625 Soybean extracellular 44.04 47.09
AT1G66970.2 Thale cress plasma membrane 47.67 46.88
CDY12605 Canola extracellular, vacuole 43.39 46.79
Bra035244.1-P Field mustard plasma membrane 45.85 46.7
CDY46687 Canola extracellular, plasma membrane, vacuole 43.26 46.58
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 43.26 46.58
CDY11996 Canola plasma membrane 46.5 46.44
Bra034037.1-P Field mustard extracellular, vacuole 43.01 46.37
CDX92806 Canola extracellular, plasma membrane, vacuole 43.01 46.37
CDY13237 Canola extracellular, plasma membrane, vacuole 45.47 46.25
CDY29432 Canola cytosol, peroxisome 34.97 45.3
CDY19634 Canola plasma membrane 41.97 44.63
CDY60410 Canola extracellular 7.77 44.12
CDY58867 Canola plasma membrane 41.06 43.91
AT3G20520.1 Thale cress plasma membrane 40.8 43.21
CDY12599 Canola cytosol 22.8 43.14
CDY42328 Canola cytosol 14.38 43.02
CDX82242 Canola cytosol 24.61 42.89
CDX86807 Canola cytosol 12.69 42.61
Bra035208.1-P Field mustard extracellular, golgi, plastid 15.03 42.49
Zm00001d015609_P002 Maize plasma membrane 41.32 41.92
Bra035774.1-P Field mustard plasma membrane 43.65 41.25
Bra034040.1-P Field mustard extracellular 7.12 40.44
PGSC0003DMT400033459 Potato endoplasmic reticulum 13.47 40.15
CDX86766 Canola plasma membrane 32.51 39.65
Bra001790.1-P Field mustard plasma membrane 42.88 39.59
CDY36036 Canola plasma membrane 43.39 39.46
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.78 35.06
CDX86765 Canola extracellular, mitochondrion, vacuole 6.61 30.72
AT1G66980.2 Thale cress plasma membrane 45.08 30.34
CDY14478 Canola plasma membrane 44.3 26.03
CDY60415 Canola plasma membrane 38.86 25.3
Zm00001d012677_P012 Maize golgi 11.92 23.53
Zm00001d022067_P001 Maize extracellular 10.75 22.31
Zm00001d033187_P001 Maize plastid 11.66 21.63
Protein Annotations
EntrezGene:103627358Gene3D:3.20.20.190MapMan:35.1UniProt:A0A1D6HBU3ProteinID:AQK72171.1GO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704
PANTHER:PTHR43620PANTHER:PTHR43620:SF2SUPFAM:SSF51695SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0008443E16
EnsemblPlantsGene:Zm00001d017036EnsemblPlants:Zm00001d017036_P002EnsemblPlants:Zm00001d017036_T002SEG:seg::
Description
Glycerophosphodiester phosphodiesterase GDPDL3
Coordinates
chr5:+:183328274..183333494
Molecular Weight (calculated)
83845.1 Da
IEP (calculated)
5.511
GRAVY (calculated)
0.040
Length
772 amino acids
Sequence
(BLAST)
001: MGRSSRACSL LGSAQLLLLL LLSLGSAAAQ KGSTWKTLSG KAPVIVAKGG FSGLFPDSSD FAYRILGTIS SPDTVMWCDV RLTKDGDGIC LPSINMDNCT
101: MIDNVFPEGK KTYNVNGVST VGWFSVDYTS TDLLPNVTRK CSYKFVLHCG LQHFDIVNCD VKQSVLSRTP VYDGSMLINS VENVFTSFNA SAVWLNVQQD
201: SFYSQFKLSM RNYILSLSKQ FITDYISSPE VNFLTSISGR VSKKTKLVFR FLDEGSIEPS TNQTYGSMLK NLTFVKTFAS GILVPKSYIW PVTPDNYLLP
301: YTSVVDDAHK AGLEIYAADF ANDFTISYNY SFDPLAEYLS FIGNSAFSVD GVLTDFPITP SEAVGCFSNL NNSKIDHAKP LVISHNGASG DYPDCTDQAY
401: EKAVADGADV IDCPVQVTKD GILICMSSVD LMDVTTVGKS SFTSQVTTIN DLKAGPGVFT FNLTWDDISK NLQPMISNPM STYKLYRNPR NKNAGNFMRL
501: SDFLTFAKGK DLSGIMITVE HAAFMAEKLG FGVVDAVVKA LDDSGYSKQT AQNVMIQSTN SSVLKKFKQE TKYSLVYMIE EGVRDAAPSS LADIKKFANA
601: VSVSTTSVLP QTHYYLTNQT NKLVTSLQSA GLQVYVYVLM NEFASQPNDF FADATSQINA YVQGAKVDGI ITDFPGTAHR YKLNSCTSMG NSAPLFMQPP
701: QPGSLLLTMA PDVQPPAAAP MPLLTDADVA EPALPPVSNT TTAASPSHAA LRMRTDVSIL IALLMLCASL LI
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.