Factsheet for Zm00001d033187_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91395	Sorghum	extracellular, plasma membrane	76.92	81.63
Os03t0603600-01	Rice	extracellular	71.15	75.7
HORVU2Hr1G087820.3	Barley	cytosol	56.01	75.4
TraesCS1D01G114700.2	Wheat	extracellular	68.51	74.61
TraesCS1A01G113300.1	Wheat	extracellular	68.27	74.35
TraesCS1D01G114600.1	Wheat	extracellular, vacuole	68.03	74.08
TraesCS1A01G113200.1	Wheat	extracellular	67.55	73.56
TraesCS1B01G133300.1	Wheat	extracellular	67.55	73.56
TraesCS1B01G133400.2	Wheat	extracellular	67.79	73.06
HORVU6Hr1G024750.1	Barley	extracellular, vacuole	13.94	70.73
HORVU6Hr1G074900.1	Barley	cytosol	27.88	69.88
Zm00001d012677_P012	Maize	golgi	63.22	67.26
Zm00001d022067_P001	Maize	extracellular	56.49	63.17
HORVU1Hr1G024870.4	Barley	cytosol	66.35	62.73
Zm00001d050917_P002	Maize	plasma membrane	21.63	11.95
Zm00001d017036_P002	Maize	plasma membrane	21.63	11.66
Zm00001d015609_P002	Maize	plasma membrane	20.43	11.17
Zm00001d052875_P001	Maize	mitochondrion	19.47	10.44
Zm00001d031412_P001	Maize	extracellular	17.79	9.93
Zm00001d022153_P006	Maize	extracellular, mitochondrion	18.03	9.65
Zm00001d025670_P001	Maize	mitochondrion	0.48	1.31

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	UniProt:A0A1D6KWT7	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	InterPro:IPR017946
InterPro:IPR030395	ProteinID:ONM06930.1	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620
PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	SignalP:SignalP-noTM	UniParc:UPI000221FBD2	EnsemblPlantsGene:Zm00001d033187	EnsemblPlants:Zm00001d033187_P001
EnsemblPlants:Zm00001d033187_T001	SEG:seg	:	:	:	:

Description

Glycerophosphoryl diester phosphodiesterase

Coordinates

chr1:+:253272958..253275838

Molecular Weight (calculated)

47343.6 Da

IEP (calculated)

5.576

GRAVY (calculated)

-0.410

Length

416 amino acids

Sequence
(BLAST)

001: MASFSPSGRM TRTAASSLAA RVVLALLLLI GVSGSGATQA ASPHTHHSRQ LDVNHKKPVQ TFRPINIAHR GSNGELPEET AAAYLRAIEE GADFIETDVL
101: ASKDGHLVCF HDVTLDATTD VADHAEFAGR KRTYEVQGED VTGWFIVDFT LEELRSLRVK QRFSFRDQRY NGKYQIITFE EYILIALYAD RTVGIYPEIK
201: NPVFINQHVK WSDGKRFEDK FVETLLRYGY GGEYMSDGWL RQPLFIQSFA PTSLIYVSNM TDSPKLLLID DTTVPTQDTN QSYHEITSDA YLAFIGSYVV
301: GIGPWKDTLV PPDPTDNRLG RPADLVARAH ALRLQVHPYT FRNENQYLHF DFRQDPYAEY AYWLDEVAVD GLFTDFTGSL HKYQEWTRPY RKEQEKTSPE
401: ALLREIAGML KNDGYD

Best Arabidopsis Sequence Match ( AT5G08030.1 )
(BLAST)

001: MAFKYLLPLL LLSLLVANCA SRPLYRLPSE AKHATKKPLQ TSRPYNLAHR GSNGELPEET APAYMRAIEE GADFIETDIL SSKDGVLICH HDVNLDDTTD
101: VADHKEFADR KRTYEVQGMN MTGFFTVDFT LKELKTLGAK QRYPFRDQQY NGKFPIITFD EYISIALDAP RVVGIYPEIK NPVFMNQQVK WADGKKFEDK
201: FVETLKKYGY KGSYLSEDWL KQPIFIQSFA ATSLVYISNM TDSPKLFLID DVTILTEDTN KTYAEITSDA YLDYIKPYVI GIGPWKDTIV PVNNNRLMTP
301: TDLVARAHSR NLQVHPYTYR NENQFLHLEF NQDPYLEYDY WLNKIGVDGL FTDFTGSLHN YQELKSPLPQ QQ

Arabidopsis Description

PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.