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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • extracellular 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:extracellular, mitochondrion
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031412_P001 Maize extracellular 70.1 73.02
Zm00001d022153_P006 Maize extracellular, mitochondrion 68.43 68.34
OQU80956 Sorghum cytosol 75.64 66.33
TraesCS7A01G243900.3 Wheat golgi 61.6 62.16
TraesCS7B01G147500.1 Wheat unclear 61.6 61.92
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 61.73 59.14
Os09t0339800-00 Rice extracellular, golgi 40.08 55.24
Os12t0456700-01 Rice cytosol 31.7 53.95
Zm00001d050917_P002 Maize plasma membrane 50.39 51.93
PGSC0003DMT400033423 Potato extracellular 8.76 51.91
Zm00001d017036_P002 Maize plasma membrane 49.74 50.0
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 30.67 47.6
KRH46280 Soybean cytosol 15.98 47.15
KRH73850 Soybean endoplasmic reticulum 45.49 46.88
KRH14296 Soybean endoplasmic reticulum 44.72 46.02
Zm00001d025670_P001 Maize mitochondrion 9.02 45.75
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 43.56 45.49
CDY72472 Canola mitochondrion 22.04 45.48
KRH46281 Soybean extracellular, golgi, plasma membrane 44.59 45.47
CDY61647 Canola extracellular, plasma membrane 43.94 45.17
CDY71959 Canola extracellular, plastid, vacuole 19.07 45.12
CDX94294 Canola extracellular, plasma membrane, vacuole 43.94 45.05
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 43.81 44.91
CDX89312 Canola extracellular, plasma membrane, vacuole 43.81 44.91
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 43.69 44.72
Bra035244.1-P Field mustard plasma membrane 43.69 44.72
CDY46687 Canola extracellular, plasma membrane, vacuole 41.24 44.63
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 41.24 44.63
CDY13237 Canola extracellular, plasma membrane, vacuole 43.56 44.53
AT5G55480.1 Thale cress plasma membrane 43.81 44.39
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 43.17 44.25
CDY17323 Canola plasma membrane 43.69 44.14
AT4G26690.1 Thale cress extracellular, vacuole 43.17 44.14
CDX92806 Canola extracellular, plasma membrane, vacuole 40.72 44.13
CDY36746 Canola plasma membrane 43.56 44.13
Bra028979.1-P Field mustard plasma membrane 43.56 44.13
Solyc12g014570.1.1 Tomato nucleus 42.65 44.07
KRG98622 Soybean extracellular, golgi, plasma membrane 42.4 43.93
Solyc07g065120.2.1 Tomato extracellular 42.53 43.82
KRH46282 Soybean extracellular, plasma membrane 42.91 43.76
PGSC0003DMT400033463 Potato extracellular, plasma membrane 42.4 43.69
PGSC0003DMT400057418 Potato extracellular 42.27 43.56
CDY45656 Canola extracellular, golgi, plasma membrane 36.47 43.34
AT1G66970.2 Thale cress plasma membrane 43.69 43.18
Bra034037.1-P Field mustard extracellular, vacuole 39.69 43.02
CDY12605 Canola extracellular, vacuole 39.69 43.02
CDY11996 Canola plasma membrane 42.65 42.82
KRG98625 Soybean extracellular 39.3 42.24
CDY58867 Canola plasma membrane 39.05 41.97
CDY29432 Canola cytosol, peroxisome 31.83 41.44
KRH46279 Soybean extracellular 38.79 41.4
CDY19634 Canola plasma membrane 37.89 40.5
Bra035208.1-P Field mustard extracellular, golgi, plastid 14.05 39.93
AT3G20520.1 Thale cress plasma membrane 37.37 39.78
CDY60410 Canola extracellular 6.96 39.71
CDY12599 Canola cytosol 20.62 39.22
GSMUA_AchrUn_... Banana extracellular 8.25 39.02
Bra034040.1-P Field mustard extracellular 6.83 38.97
CDX86766 Canola plasma membrane 31.57 38.7
CDX86807 Canola cytosol 11.47 38.7
Zm00001d015609_P002 Maize plasma membrane 37.76 38.5
CDY42328 Canola cytosol 12.37 37.21
Bra035774.1-P Field mustard plasma membrane 39.05 37.09
CDX82242 Canola cytosol 20.88 36.57
PGSC0003DMT400033459 Potato endoplasmic reticulum 11.86 35.52
CDY36036 Canola plasma membrane 38.02 34.75
Bra001790.1-P Field mustard plasma membrane 36.98 34.33
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.01 33.82
CDX86765 Canola extracellular, mitochondrion, vacuole 6.31 29.52
AT1G66980.2 Thale cress plasma membrane 42.78 28.95
CDY14478 Canola plasma membrane 42.91 25.34
CDY60415 Canola plasma membrane 37.63 24.62
Zm00001d022067_P001 Maize extracellular 10.44 21.77
Zm00001d012677_P012 Maize golgi 10.31 20.46
Zm00001d033187_P001 Maize plastid 10.44 19.47
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1UniProt:A0A1D6QKM1ProteinID:AQK58267.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF6SUPFAM:SSF51695SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0008423BDBEnsemblPlantsGene:Zm00001d052875EnsemblPlants:Zm00001d052875_P001EnsemblPlants:Zm00001d052875_T001SEG:seg
Description
Glycerophosphodiester phosphodiesterase GDPDL3
Coordinates
chr4:+:203129177..203132527
Molecular Weight (calculated)
82162.1 Da
IEP (calculated)
5.848
GRAVY (calculated)
0.156
Length
776 amino acids
Sequence
(BLAST)
001: MATSRRHVGG ERAGAGAGGV SSFAALLLGC AVVSAAAQGP RLPSDYKTLS GAAPLVVAEG GFSGLFPDSS EGAYAFAVAA SAPGTAMWCD VQLTKDGVGV
101: CLRDINMKNC TTVDQAFPAR RRTHVIDGVR KTGWFAPDFT IAELQSVYLT QAIWSRTDRL DAGMYPIVNV TGLPSLVKPS PVWLNVQHPT FYKQRGLDMS
201: SYILSTHQDL VPTVAYISSP ELGFLQTISA VAGRTRTTTK LVFSFLDKAL LDHSVNRTYG SLLANLTLVR SVASGIMVPK SYIWPVTGDN YLLPSTSVVT
301: DAHKAGLEVY ASDFANDRVI PYNYSYDPVA EYLSFVGDGG FSVDGVLSDY PITASEAIGC FAKLNSSKTD HGKPLVISHN GASGDYPDCT DLAYHSAIDD
401: GADVIDCPVQ VTSDGVLVCM SSVNLLDTTN VQTTPLATPL CLVPEIQSTP GIFTFNLTWA SISSGALKPK ISSPVSEYYL VRNPRYASQG KFLKLSDFLA
501: MNAAYIATSL GIDVVDSVTA ALNAAGFDKQ TSKQVLIQST DSAVLVKLKQ QGTRCRLVYT LPLGIGDASN SSLQDMKNFA EAVVVDRGSV FAVSYAFIEG
601: QNRLVPDLQA AGLAVFAQVF RNEFVARPID FFGDATVEIN YYVQALGLAG LIADFPRTAR RYMENTCTVL GNGMPGYMRP VEPGAIMKLL RSFQAQPPYV
701: APMPALNASS VEEPPLPPAA PRTVPPGGGL SGPADAAGTP AAGARHTAAV GTGLLLVVVS AALLVWADTR ETVANL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.