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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82242 Canola cytosol 50.88 97.52
Bra001790.1-P Field mustard plasma membrane 93.64 95.1
CDY29432 Canola cytosol, peroxisome 48.41 68.96
AT3G20520.1 Thale cress plasma membrane 58.89 68.59
CDY19634 Canola plasma membrane 57.83 67.63
PGSC0003DMT400033423 Potato extracellular 8.24 53.44
KRH46279 Soybean extracellular 44.05 51.44
KRH46280 Soybean cytosol 15.78 50.95
KRG98625 Soybean extracellular 42.99 50.55
Solyc12g014570.1.1 Tomato nucleus 43.93 49.67
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 44.05 49.41
PGSC0003DMT400033463 Potato extracellular, plasma membrane 43.82 49.4
CDY71959 Canola extracellular, plastid, vacuole 18.85 48.78
CDY72472 Canola mitochondrion 21.44 48.4
KRH46281 Soybean extracellular, golgi, plasma membrane 43.23 48.23
KRH14296 Soybean endoplasmic reticulum 42.28 47.61
CDY61647 Canola extracellular, plasma membrane 42.28 47.55
KRH73850 Soybean endoplasmic reticulum 42.17 47.54
CDX89312 Canola extracellular, plasma membrane, vacuole 42.28 47.42
Solyc07g065120.2.1 Tomato extracellular 42.05 47.41
PGSC0003DMT400057418 Potato extracellular 41.93 47.28
CDY17323 Canola plasma membrane 42.76 47.27
CDX94294 Canola extracellular, plasma membrane, vacuole 42.05 47.16
CDY36746 Canola plasma membrane 42.52 47.13
CDX92806 Canola extracellular, plasma membrane, vacuole 39.69 47.07
CDY46687 Canola extracellular, plasma membrane, vacuole 39.69 47.0
KRH46282 Soybean extracellular, plasma membrane 41.81 46.65
CDY11996 Canola plasma membrane 41.81 45.92
CDY13237 Canola extracellular, plasma membrane, vacuole 40.99 45.85
CDY45656 Canola extracellular, golgi, plasma membrane 35.22 45.79
CDY12605 Canola extracellular, vacuole 38.16 45.25
GSMUA_Achr8P25690_001 Banana plasma membrane 40.4 45.13
CDY60410 Canola extracellular 7.18 44.85
EES05342 Sorghum plasma membrane 39.69 44.75
KRG98622 Soybean extracellular, golgi, plasma membrane 39.46 44.73
TraesCS6A01G200600.1 Wheat golgi 39.22 44.52
Zm00001d050917_P002 Maize plasma membrane 39.46 44.49
TraesCS6D01G189300.1 Wheat unclear 38.87 44.18
TraesCS2D01G332500.1 Wheat golgi 38.63 44.09
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 38.99 44.07
CDY58867 Canola plasma membrane 37.46 44.04
TraesCS6B01G226700.2 Wheat golgi 38.75 44.04
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 38.4 43.82
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 38.4 43.82
HORVU2Hr1G081920.3 Barley plasma membrane 38.4 43.82
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 40.52 43.77
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 39.34 43.66
EES10974 Sorghum golgi 38.4 43.52
Zm00001d017036_P002 Maize plasma membrane 39.46 43.39
CDY12599 Canola cytosol 20.61 42.89
CDY12601 Canola extracellular 6.71 41.91
TraesCS7A01G243900.3 Wheat golgi 37.81 41.74
GSMUA_AchrUn_... Banana extracellular 8.01 41.46
KXG36695 Sorghum plasma membrane 37.69 41.29
Zm00001d022153_P006 Maize extracellular, mitochondrion 37.34 40.8
CDX86766 Canola plasma membrane 30.39 40.76
TraesCS7B01G147500.1 Wheat unclear 36.98 40.67
CDY11831 Canola extracellular, vacuole 27.09 40.64
GSMUA_Achr3P03920_001 Banana cytosol 37.46 40.25
CDY43885 Canola extracellular, golgi, plasma membrane 35.22 39.81
CDY32730 Canola plasma membrane 34.86 39.73
CDY02788 Canola plasma membrane 34.86 39.73
CDY32720 Canola extracellular, plastid, vacuole 35.1 39.63
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 37.46 39.26
CDY02800 Canola extracellular, plasma membrane, plastid 34.39 39.04
Zm00001d025670_P001 Maize mitochondrion 6.95 38.56
CDX88656 Canola plasma membrane 34.86 38.19
Zm00001d052875_P001 Maize mitochondrion 34.75 38.02
PGSC0003DMT400033459 Potato endoplasmic reticulum 11.54 37.84
Zm00001d031412_P001 Maize extracellular 32.98 37.58
CDX86807 Canola cytosol 10.13 37.39
CDY42328 Canola cytosol 11.19 36.82
OQU80956 Sorghum cytosol 37.46 35.93
CDX86765 Canola extracellular, mitochondrion, vacuole 6.48 33.13
CDX71386 Canola extracellular 7.3 32.8
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.3 30.56
CDY11832 Canola cytosol, peroxisome, plastid 5.18 28.76
CDY14478 Canola plasma membrane 39.81 25.72
CDY60415 Canola plasma membrane 34.98 25.04
CDY11071 Canola extracellular, golgi 10.37 22.51
CDX73068 Canola extracellular 10.37 22.28
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 10.95 22.14
CDX85814 Canola extracellular 4.95 21.43
CDX68196 Canola golgi 10.01 21.41
CDX68195 Canola peroxisome 10.13 20.87
CDX69980 Canola extracellular, golgi, vacuole 8.72 19.89
CDX99041 Canola extracellular 8.72 19.84
CDX85815 Canola mitochondrion 5.65 16.61
Protein Annotations
Gene3D:1.20.58.1140MapMan:24.2.22Gene3D:3.20.20.190MapMan:5.8.3GO:A0A078HE35UniProt:A0A078HE35
EnsemblPlants:CDY36036ProteinID:CDY36036ProteinID:CDY36036.1ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00059849001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009PFAM:PF03647InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF8
SUPFAM:SSF51695InterPro:TMEM14TMHMM:TMhelixUniParc:UPI0004EEEA47SEG:seg:
Description
BnaC03g41620DBnaC03g41620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE35]
Coordinates
chrLK032366:-:26502..31485
Molecular Weight (calculated)
94339.7 Da
IEP (calculated)
8.330
GRAVY (calculated)
0.026
Length
849 amino acids
Sequence
(BLAST)
001: MHDFCFTIPY GMLLIGGGFI GYMKKGSITS FAGGAGAGLL LILAGYLSLN AFKKKKTSTI AVVLQTVISA ALTLVMGQRY LLTQKIMPAG LVAVISALMT
101: CFYVYKIATG GNKIPSKAAE QRLRQDSCMN IKTGDKQGRL KLQFFNLHNV SASSWQTLSG KPPVVIARGG FSGVFPDSSS KAYELVSVTT SLNLALWCDL
201: QLTKDGVGIC FPNLNLYNDS DVKDVYPNKN EWFSVDFTWK DLSDVNLVQN VKSRSGVFDG SYQILTVEIV AELGAPGLWL NIQNSAFYRQ HNLSMRNYVV
301: SLSKRVDFIS SPEISFLKSM KKDVTKLIFR FLNQDQIEPF TNQTYSSLSK NLSYIKTFSS GILVPKSYIW PVGSDLYLKP HTSLVTEAHR QGLQVFASEF
401: ANDFVFAYNY SYDPTAEYLS FIDSGNFSVD GFLSDFPVTP YRAISCFSHL DTKEDEEPAV VTIISNDGAS GDFPGCTDLA YEKAVKDGVD ILDCNVQMSK
501: DKIPFCMSSI DLLNTTNVFN TSFRNLSSTV AEIQPKSGIY TFSLTMSQIK TLKPVISNPK EDHALFRNPR NKNVGKFLTL SEFLFLANRY NSLLGVLIKV
601: ENAVYLAKHQ GISVVDAVLN KTERLTTQEG QTTSIAIMFQ STDKSVLMDF KEKKLIYPDE LVYRVDEDIR DVTDSAIKEI MSFAGTIVIS KESVLPYNGG
701: LVKKKTDVVA RLKASGFRVY VETFSNEFVT QPFDLFSDST VEIDFFVQAV KIDGIITDFP ATTARYRKSQ CYREMSMFRT GELLPFGNPR LLSPAQAPYP
801: LLVESDVMEP PLLDVKSKNS TPTKAMAKAI QVFSPVRTMA VLVIFFISV
Best Arabidopsis Sequence Match ( AT3G20520.1 )
(BLAST)
001: MACPRVIFLI LITFFILQTA FSSSWQTLSG KPPAVIARGG FSGMFPDSSI QAYQLVNITT SPDVMLWCDL QLTKDGVGIC FPNLKLDNGS NVIRIDPHYK
101: ERFSVDFTWK ELSDVKLAQG VVSRPYIFDD VSSILAIEEV AKLTASGLWL NIQDSAFYAK HNLSMRNSVV SLSRRLKVNF ISSPGISFLK SMKNSVKPTV
201: TKLIFRFLKQ EHIEPFTNQS YGSLAKNLSY IRTFSSGILV PKSYIWPVDS ALYLQPHTSL VTDAHKEGLQ VFASEFANDF VIAYNYSYDP TAEYLSFIDN
301: GNFSVDGFLS DFPVTPYRAI NCFSHVDPKR AKEQAKITII SKNGASGDFP GCTDLAYQRA ASDGADILDC NVQMSKDKIP FCMSSFDLIN STNVIETSFR
401: NLSSVVSEIN PRRSGIYTFS LTMSQIQTLK PTISNLEKDS GLFRNPRNNK AGKFLTLSEF LFLPNRYSSL LGLLIEVENA AYLVEHQGIS VVDAVLDELK
501: RATTQQNKTS ARTILIQSTD KSVLMKFKEK NKMNHDELVY RVDDNIRDVA DSAIKDIKNF AGSIVISKKS VFPYKGFIIL EKETNIASKL KSNGLRVYVE
601: RFSNECVTHA FDFYDDPTLE IDSFVRDVQI DGIITDFPAT TARYRKNKCY GEFGLTTTGE LITFANPMLL PPAEAPYPAL LDSDVTEPPL PEARSQPPAS
701: SPSKAEEKAI EVPFAFIAMA ILVCFFISV
Arabidopsis Description
GDPDL5Glycerophosphodiester phosphodiesterase GDPDL5 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.