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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022153_P006 Maize extracellular, mitochondrion 91.48 91.25
OQU80956 Sorghum cytosol 81.42 71.3
TraesCS7B01G147500.1 Wheat unclear 66.19 66.45
TraesCS7A01G243900.3 Wheat golgi 64.52 65.02
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 66.32 63.46
Os09t0339800-00 Rice extracellular, golgi 43.61 60.04
Os12t0456700-01 Rice cytosol 34.45 58.55
EES10974 Sorghum golgi 51.87 53.67
EES05342 Sorghum plasma membrane 51.61 53.12
PGSC0003DMT400033423 Potato extracellular 8.26 48.85
KRH46280 Soybean cytosol 16.52 48.67
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 31.23 48.4
KRH73850 Soybean endoplasmic reticulum 46.32 47.68
KRH14296 Soybean endoplasmic reticulum 46.06 47.35
CDY71959 Canola extracellular, plastid, vacuole 19.87 46.95
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 45.68 46.76
KRH46281 Soybean extracellular, golgi, plasma membrane 45.42 46.25
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 44.13 46.03
PGSC0003DMT400057418 Potato extracellular 44.65 45.95
Solyc07g065120.2.1 Tomato extracellular 44.52 45.82
Bra035244.1-P Field mustard plasma membrane 44.77 45.78
Solyc12g014570.1.1 Tomato nucleus 44.26 45.67
CDY61647 Canola extracellular, plasma membrane 44.39 45.56
CDX94294 Canola extracellular, plasma membrane, vacuole 44.39 45.44
AT5G55480.1 Thale cress plasma membrane 44.77 45.3
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 44.26 45.25
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 41.81 45.19
CDX89312 Canola extracellular, plasma membrane, vacuole 44.13 45.18
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 44.13 45.18
PGSC0003DMT400033463 Potato extracellular, plasma membrane 43.87 45.15
CDY46687 Canola extracellular, plasma membrane, vacuole 41.68 45.05
AT4G26690.1 Thale cress extracellular, vacuole 44.0 44.93
Bra028979.1-P Field mustard plasma membrane 44.39 44.91
CDY17323 Canola plasma membrane 44.39 44.79
CDY36746 Canola plasma membrane 44.26 44.78
CDY72472 Canola mitochondrion 21.68 44.68
KRH46282 Soybean extracellular, plasma membrane 43.87 44.68
KRG98622 Soybean extracellular, golgi, plasma membrane 43.1 44.59
CDX92806 Canola extracellular, plasma membrane, vacuole 41.16 44.55
CDY13237 Canola extracellular, plasma membrane, vacuole 43.61 44.53
CDY29432 Canola cytosol, peroxisome 34.19 44.46
CDY45656 Canola extracellular, golgi, plasma membrane 37.16 44.1
AT1G66970.2 Thale cress plasma membrane 44.65 44.08
CDY11996 Canola plasma membrane 43.87 43.98
KRG98625 Soybean extracellular 40.39 43.35
Bra034037.1-P Field mustard extracellular, vacuole 40.0 43.3
CDY19634 Canola plasma membrane 40.52 43.25
CDY12605 Canola extracellular, vacuole 39.74 43.02
KRH46279 Soybean extracellular 40.0 42.64
CDY58867 Canola plasma membrane 39.48 42.38
AT3G20520.1 Thale cress plasma membrane 39.1 41.56
Bra035208.1-P Field mustard extracellular, golgi, plastid 14.58 41.39
CDY60410 Canola extracellular 7.23 41.18
Bra034040.1-P Field mustard extracellular 7.1 40.44
CDX86807 Canola cytosol 12.0 40.43
CDX82242 Canola cytosol 23.1 40.41
GSMUA_AchrUn_... Banana extracellular 8.52 40.24
KXG29647 Sorghum extracellular, plasma membrane 38.58 39.71
CDY12599 Canola cytosol 20.77 39.46
Bra035774.1-P Field mustard plasma membrane 41.55 39.41
CDX86766 Canola plasma membrane 31.87 39.02
CDY42328 Canola cytosol 12.77 38.37
EER90089 Sorghum extracellular, plasma membrane 37.16 37.84
CDY36036 Canola plasma membrane 41.29 37.69
Bra001790.1-P Field mustard plasma membrane 40.65 37.68
PGSC0003DMT400033459 Potato endoplasmic reticulum 12.39 37.07
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.84 34.44
CDX86765 Canola extracellular, mitochondrion, vacuole 6.45 30.12
AT1G66980.2 Thale cress plasma membrane 42.97 29.03
CDY14478 Canola plasma membrane 44.39 26.18
CDY60415 Canola plasma membrane 37.81 24.7
EER99675 Sorghum extracellular 10.45 21.77
EES01511 Sorghum extracellular, golgi 10.84 21.48
OQU91395 Sorghum extracellular, plasma membrane 10.45 20.66
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1UniProt:A0A1B6QFK5GO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946
InterPro:IPR030395EnsemblPlants:KXG36695ProteinID:KXG36695ProteinID:KXG36695.1ProteinID:OQU90266.1PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51257PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF6EnsemblPlantsGene:SORBI_3002G375900
SUPFAM:SSF51695TMHMM:TMhelixUniParc:UPI00081AD55ESEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:73328202..73333617
Molecular Weight (calculated)
84111.5 Da
IEP (calculated)
7.729
GRAVY (calculated)
-0.033
Length
775 amino acids
Sequence
(BLAST)
001: MRRSRRQRNG RGGGSGQRGV RVAFAFAVLL GCVMPLVGGA AAQGPRLPSD YKTLSGAAPL VVAKGGFSGV FPDSSQGAYS FAMIASAPDT AMWCDVQLTK
101: DGVGVCLRDI NMKNCTTVDQ AYPARTRTYV IDGVQKSGWF VSDFTIAELQ SVSLTQAIWS RTERFDGIYP IVSVTDFRSL VMPSPVWLNV QHDIFYKQHG
201: LDMRNYIFSI KKRVSMDYIS SPELGFLKNI SGRVGRKTKL VFRFLDKALL DHSINQTYGS LSSNLTFIKS IASGIIVPKS YIWPVTKDNY LLPSTSIVTE
301: AHNAGLEIYA SDFANDRIIP YNYSYDPLAE YLNFVNDGGF SVDGVLSEHP ITASEAIGCF TKLNSNKTDH GEPLVISHNG ASGDYPDCTD LAYHSAIDNG
401: ADIIDCPVQV TSDGVLMCMS SGNLLDTTNV QTTTYSSLVS VVPKIQPQPG IFTFNLTWAD MNSNALKPKI SSPASGYSLV RNPRYTNQGK FLKLSDFLAI
501: AMDKDLSGVM IIIENAAFLI NSLGIDIVDS VTTALSAAGF NNHPTKEVLI QSKDSAVLVK LKQKKTKSKL VYTLPSGIGD ASNSSLKDIK KFAEAVVVDS
601: KSVFTLSSDF IIRQNSLVQD LQSAGLALYA EVFRNEFVAQ PLDFFGDETV EINYYVQSFN LSGIITDFPK TVRRYKKNTC TVLGNDMPNY MQPPQAGSLA
701: QFLQTFKTQP PSLPPMPTLS SSSVEEPPLP TVASRSVSDG SSSGGTRTPG TPSDAHTATM SAGMLLVMVF TALLI
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.