Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:golgi
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42328 Canola cytosol 63.48 56.59
PGSC0003DMT400033459 Potato endoplasmic reticulum 46.09 40.93
CDY11832 Canola cytosol, peroxisome, plastid 24.78 37.25
CDY12599 Canola cytosol 57.83 32.6
Bra035244.1-P Field mustard plasma membrane 99.13 30.08
CDY13237 Canola extracellular, plasma membrane, vacuole 97.39 29.51
CDY61647 Canola extracellular, plasma membrane 84.78 25.83
CDY46687 Canola extracellular, plasma membrane, vacuole 73.91 23.71
CDX92806 Canola extracellular, plasma membrane, vacuole 73.04 23.46
CDY45656 Canola extracellular, golgi, plasma membrane 66.52 23.43
CDY12605 Canola extracellular, vacuole 72.61 23.32
AT4G26690.1 Thale cress extracellular, vacuole 75.22 22.79
CDX94294 Canola extracellular, plasma membrane, vacuole 73.04 22.19
CDX89312 Canola extracellular, plasma membrane, vacuole 72.17 21.93
CDX86766 Canola plasma membrane 57.39 20.85
CDX82242 Canola cytosol 38.7 20.09
CDY17323 Canola plasma membrane 66.52 19.92
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 3.04 19.44
CDY36746 Canola plasma membrane 63.48 19.06
PGSC0003DMT400033423 Potato extracellular 10.43 18.32
CDY58867 Canola plasma membrane 56.96 18.14
CDY11996 Canola plasma membrane 56.09 16.69
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 52.61 15.98
Solyc07g065120.2.1 Tomato extracellular 51.3 15.67
CDY29432 Canola cytosol, peroxisome 40.43 15.6
PGSC0003DMT400057418 Potato extracellular 50.87 15.54
KRH46281 Soybean extracellular, golgi, plasma membrane 50.43 15.24
KRH73850 Soybean endoplasmic reticulum 49.13 15.01
KRH14296 Soybean endoplasmic reticulum 49.13 14.99
KRH46282 Soybean extracellular, plasma membrane 49.57 14.98
PGSC0003DMT400033463 Potato extracellular, plasma membrane 48.7 14.87
GSMUA_Achr8P25690_001 Banana plasma membrane 49.13 14.87
KRG98622 Soybean extracellular, golgi, plasma membrane 48.26 14.82
Solyc12g014570.1.1 Tomato nucleus 48.26 14.78
KRH46279 Soybean extracellular 46.52 14.72
KRG98625 Soybean extracellular 45.65 14.54
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 46.52 14.25
HORVU2Hr1G081920.3 Barley plasma membrane 45.22 13.98
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 45.65 13.73
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 43.91 13.58
TraesCS6A01G200600.1 Wheat golgi 43.91 13.5
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 46.09 13.49
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 43.48 13.44
TraesCS2D01G332500.1 Wheat golgi 43.48 13.44
TraesCS6D01G189300.1 Wheat unclear 43.04 13.25
TraesCS6B01G226700.2 Wheat golgi 42.61 13.12
Zm00001d050917_P002 Maize plasma membrane 42.61 13.01
EES05342 Sorghum plasma membrane 42.17 12.88
EES10974 Sorghum golgi 41.74 12.82
Zm00001d017036_P002 Maize plasma membrane 42.61 12.69
TraesCS7A01G243900.3 Wheat golgi 42.17 12.61
CDY19634 Canola plasma membrane 39.13 12.4
TraesCS7B01G147500.1 Wheat unclear 41.3 12.31
Zm00001d022153_P006 Maize extracellular, mitochondrion 40.87 12.1
CDY02800 Canola extracellular, plasma membrane, plastid 39.13 12.03
KXG36695 Sorghum plasma membrane 40.43 12.0
CDY14478 Canola plasma membrane 68.26 11.95
Zm00001d031412_P001 Maize extracellular 38.26 11.81
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 41.3 11.73
CDY43885 Canola extracellular, golgi, plasma membrane 38.26 11.72
CDY32720 Canola extracellular, plastid, vacuole 38.26 11.7
Zm00001d052875_P001 Maize mitochondrion 38.7 11.47
CDY60415 Canola plasma membrane 58.26 11.3
CDY32730 Canola plasma membrane 36.09 11.14
CDY02788 Canola plasma membrane 35.65 11.01
CDX88656 Canola plasma membrane 36.52 10.84
CDX85815 Canola mitochondrion 13.48 10.73
OQU80956 Sorghum cytosol 40.87 10.62
GSMUA_Achr3P03920_001 Banana cytosol 35.65 10.38
CDY36036 Canola plasma membrane 37.39 10.13
CDX68195 Canola peroxisome 16.09 8.98
CDY11071 Canola extracellular, golgi 15.22 8.95
CDX68196 Canola golgi 15.22 8.82
CDX73068 Canola extracellular 14.78 8.61
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 15.22 8.33
CDX69980 Canola extracellular, golgi, vacuole 12.17 7.53
CDX99041 Canola extracellular 12.17 7.51
GSMUA_AchrUn_... Banana extracellular 2.61 3.66
CDX85814 Canola extracellular 1.3 1.53
CDY11831 Canola extracellular, vacuole 2.61 1.06
CDY72472 Canola mitochondrion 1.3 0.8
CDX86765 Canola extracellular, mitochondrion, vacuole 0.0 0.0
KRH46280 Soybean cytosol 0.0 0.0
Zm00001d025670_P001 Maize mitochondrion 0.0 0.0
CDX71386 Canola extracellular 0.0 0.0
CDY60410 Canola extracellular 0.0 0.0
CDY71959 Canola extracellular, plastid, vacuole 0.0 0.0
CDY12601 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078DCL0EnsemblPlants:CDX86807ProteinID:CDX86807ProteinID:CDX86807.1
GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152
GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00145546001InterPro:IPR017946InterPro:IPR030395InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695UniParc:UPI0004EDC2E4SEG:seg
Description
BnaA09g21970D
Coordinates
chrLK031847:-:892050..893105
Molecular Weight (calculated)
25295.1 Da
IEP (calculated)
5.043
GRAVY (calculated)
-0.116
Length
230 amino acids
Sequence
(BLAST)
001: MIQSTNSSVL VEFKKQSKYE AVYKVDEKIS DISDSAIEDI KKFANAVVIG KESVFSLLDS FITRQTNVVE KLQKSKLPVY VELFQNEFVS QPYDFFSDPT
101: VEINSYILGA GINGTITEFP FTAARYKRNR CLGTQETLPP YMAPFKPGSL LQAVNAIPPA QAPNPVFTDD DVTEPPLPPV TAKSPTSAPG DSFTNAQAPR
201: PSGQTRLTLS LRFSVFASLL LLWISSPLCS
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.