Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42328 Canola cytosol 37.5 59.3
CDX86807 Canola cytosol 32.6 57.83
PGSC0003DMT400033423 Potato extracellular 15.44 48.09
CDY45656 Canola extracellular, golgi, plasma membrane 67.4 42.11
CDY46687 Canola extracellular, plasma membrane, vacuole 72.79 41.42
CDY12605 Canola extracellular, vacuole 71.57 40.78
CDX92806 Canola extracellular, plasma membrane, vacuole 71.57 40.78
CDX82242 Canola cytosol 43.87 40.41
CDX94294 Canola extracellular, plasma membrane, vacuole 73.53 39.63
PGSC0003DMT400033459 Potato endoplasmic reticulum 25.0 39.38
CDX89312 Canola extracellular, plasma membrane, vacuole 73.04 39.37
CDY13237 Canola extracellular, plasma membrane, vacuole 72.06 38.74
CDY61647 Canola extracellular, plasma membrane 71.57 38.68
AT4G26690.1 Thale cress extracellular, vacuole 68.63 36.89
CDY72472 Canola mitochondrion 33.82 36.7
CDY17323 Canola plasma membrane 67.16 35.68
CDX86766 Canola plasma membrane 54.9 35.39
CDY36746 Canola plasma membrane 64.46 34.33
CDY11996 Canola plasma membrane 64.46 34.02
CDY60415 Canola plasma membrane 92.16 31.7
CDY58867 Canola plasma membrane 54.9 31.02
CDY29432 Canola cytosol, peroxisome 44.12 30.2
KRG98625 Soybean extracellular 51.23 28.95
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 52.7 28.4
KRH46279 Soybean extracellular 50.49 28.34
KRH73850 Soybean endoplasmic reticulum 51.47 27.89
KRH46281 Soybean extracellular, golgi, plasma membrane 51.96 27.86
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 2.45 27.78
KRH46282 Soybean extracellular, plasma membrane 51.72 27.73
KRG98622 Soybean extracellular, golgi, plasma membrane 50.74 27.64
KRH14296 Soybean endoplasmic reticulum 50.98 27.59
Solyc12g014570.1.1 Tomato nucleus 49.26 26.76
Solyc07g065120.2.1 Tomato extracellular 48.77 26.43
PGSC0003DMT400033463 Potato extracellular, plasma membrane 48.77 26.43
PGSC0003DMT400057418 Potato extracellular 48.28 26.16
CDY11832 Canola cytosol, peroxisome, plastid 9.56 25.49
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 45.83 24.9
GSMUA_Achr8P25690_001 Banana plasma membrane 45.83 24.61
TraesCS6A01G200600.1 Wheat golgi 45.1 24.6
CDY19634 Canola plasma membrane 43.38 24.38
TraesCS2D01G332500.1 Wheat golgi 44.36 24.33
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 44.12 24.19
TraesCS6D01G189300.1 Wheat unclear 44.12 24.1
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 43.87 24.06
HORVU2Hr1G081920.3 Barley plasma membrane 43.87 24.06
TraesCS6B01G226700.2 Wheat golgi 43.87 23.96
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 44.85 23.92
EES05342 Sorghum plasma membrane 43.87 23.77
EES10974 Sorghum golgi 43.63 23.77
Zm00001d050917_P002 Maize plasma membrane 43.38 23.51
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 44.85 23.28
CDY32720 Canola extracellular, plastid, vacuole 42.65 23.14
Zm00001d017036_P002 Maize plasma membrane 43.14 22.8
CDY02800 Canola extracellular, plasma membrane, plastid 41.42 22.59
CDY02788 Canola plasma membrane 40.93 22.42
CDY43885 Canola extracellular, golgi, plasma membrane 41.18 22.37
TraesCS7A01G243900.3 Wheat golgi 41.91 22.24
CDY32730 Canola plasma membrane 40.44 22.15
CDY14478 Canola plasma membrane 70.83 21.99
TraesCS7B01G147500.1 Wheat unclear 40.93 21.63
CDX88656 Canola plasma membrane 40.93 21.55
KXG36695 Sorghum plasma membrane 39.46 20.77
Zm00001d022153_P006 Maize extracellular, mitochondrion 39.46 20.72
CDY11071 Canola extracellular, golgi 19.85 20.72
Zm00001d052875_P001 Maize mitochondrion 39.22 20.62
CDY36036 Canola plasma membrane 42.89 20.61
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 40.69 20.49
CDX73068 Canola extracellular 19.36 20.0
CDX68196 Canola golgi 19.36 19.9
GSMUA_Achr3P03920_001 Banana cytosol 37.75 19.49
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 19.85 19.29
OQU80956 Sorghum cytosol 41.42 19.1
CDX69980 Canola extracellular, golgi, vacuole 17.4 19.09
CDX99041 Canola extracellular 17.4 19.03
CDX68195 Canola peroxisome 19.12 18.93
Zm00001d031412_P001 Maize extracellular 34.07 18.66
CDX85815 Canola mitochondrion 12.5 17.65
CDY11831 Canola extracellular, vacuole 23.28 16.78
CDX85814 Canola extracellular 6.86 14.29
GSMUA_AchrUn_... Banana extracellular 2.94 7.32
KRH46280 Soybean cytosol 3.19 4.94
Zm00001d025670_P001 Maize mitochondrion 0.98 2.61
CDY60410 Canola extracellular 0.49 1.47
CDY12601 Canola extracellular 0.49 1.47
CDY71959 Canola extracellular, plastid, vacuole 0.25 0.3
CDX86765 Canola extracellular, mitochondrion, vacuole 0.0 0.0
CDX71386 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078FHZ0UniProt:A0A078FHZ0EnsemblPlants:CDY12599ProteinID:CDY12599
ProteinID:CDY12599.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00070098001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
UniParc:UPI0004EE369CSEG:seg::::
Description
BnaA02g12670DBnaA02g12670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHZ0]
Coordinates
chrLK032025:-:108496..111633
Molecular Weight (calculated)
44452.8 Da
IEP (calculated)
5.295
GRAVY (calculated)
-0.195
Length
408 amino acids
Sequence
(BLAST)
001: MDNGDFSVDG VLSDFPITAS ASIDCFSHIG RNATKQVDFL VISKHGASGD YPGCTNLAYD KAIKDGADVI DCSVQMSREG KPFCSNSIDL EKSTMAAQTP
101: LRNRSTIIPE ISSHAGIYTF SLTWPEIYNL TPAISNPYRN PNERDSGRIM SLFEFLNLAK NSTSLSGILI SVENAVYLRE KKGLDLAKAV LDTLKEAGYS
201: NGTTTKRVMI QSTNSSVLVD IKKQSKYETV YKVEKTIDDI SDSAIEDIKK FADAVVIIKP SVLPLCDDSF VTGKTNVVER LQKSKLLVYV ELFQNEFVSD
301: ATVEINSYIT GAGINGTITE FPLTASKYKR NRCLGTKETL PYMAPVIPRG LLQTVNPLSP APAPSPAPSP VFTDDYVAGP PLPPNLSFTN DGRYKLCSQP
401: FSSVDSQS
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.