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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60410 Canola extracellular 38.56 43.38
Bra034040.1-P Field mustard extracellular 38.56 43.38
CDX86765 Canola extracellular, mitochondrion, vacuole 30.72 28.31
CDY71959 Canola extracellular, plastid, vacuole 43.14 20.12
Bra035208.1-P Field mustard extracellular, golgi, plastid 33.33 18.68
EES10974 Sorghum golgi 86.27 17.62
Os04t0472300-01 Rice extracellular, plasma membrane 77.12 15.95
TraesCS2D01G332500.1 Wheat golgi 75.82 15.59
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 75.82 15.59
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 75.16 15.46
HORVU2Hr1G081920.3 Barley plasma membrane 73.86 15.19
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 48.37 14.8
KRH46280 Soybean cytosol 24.18 14.07
Zm00001d050917_P002 Maize plasma membrane 66.01 13.41
Zm00001d017036_P002 Maize plasma membrane 65.36 12.95
GSMUA_Achr8P25690_001 Banana plasma membrane 58.17 11.71
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 59.48 11.58
GSMUA_Achr3P03920_001 Banana cytosol 55.56 10.76
KRH46279 Soybean extracellular 48.37 10.18
AT4G26690.1 Thale cress extracellular, vacuole 48.37 9.75
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 47.71 9.64
KRG98625 Soybean extracellular 45.1 9.56
Zm00001d031412_P001 Maize extracellular 46.41 9.53
PGSC0003DMT400057418 Potato extracellular 46.41 9.43
CDX94294 Canola extracellular, plasma membrane, vacuole 46.41 9.38
KRH46282 Soybean extracellular, plasma membrane 46.41 9.33
KRH46281 Soybean extracellular, golgi, plasma membrane 46.41 9.33
Solyc12g014570.1.1 Tomato nucleus 45.75 9.32
Solyc07g065120.2.1 Tomato extracellular 45.75 9.3
KRH73850 Soybean endoplasmic reticulum 45.75 9.3
KRH14296 Soybean endoplasmic reticulum 45.75 9.28
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 45.75 9.25
CDX89312 Canola extracellular, plasma membrane, vacuole 45.75 9.25
PGSC0003DMT400033463 Potato extracellular, plasma membrane 45.1 9.16
CDY36746 Canola plasma membrane 45.75 9.14
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 45.1 9.1
CDY13237 Canola extracellular, plasma membrane, vacuole 45.1 9.09
CDX92806 Canola extracellular, plasma membrane, vacuole 42.48 9.08
Zm00001d052875_P001 Maize mitochondrion 45.75 9.02
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 43.79 9.02
Zm00001d022153_P006 Maize extracellular, mitochondrion 45.75 9.01
AT5G55480.1 Thale cress plasma membrane 45.1 9.01
Bra028979.1-P Field mustard plasma membrane 45.1 9.01
CDY61647 Canola extracellular, plasma membrane 44.44 9.01
CDY17323 Canola plasma membrane 45.1 8.98
Bra035244.1-P Field mustard plasma membrane 44.44 8.97
CDY46687 Canola extracellular, plasma membrane, vacuole 41.83 8.93
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 41.83 8.93
KRG98622 Soybean extracellular, golgi, plasma membrane 42.48 8.68
CDY11996 Canola plasma membrane 43.79 8.67
AT1G66970.2 Thale cress plasma membrane 44.44 8.66
Bra035774.1-P Field mustard plasma membrane 41.18 7.71
AT3G20520.1 Thale cress plasma membrane 36.6 7.68
CDX86766 Canola plasma membrane 31.37 7.58
CDY19634 Canola plasma membrane 35.95 7.58
Zm00001d015609_P002 Maize plasma membrane 36.6 7.36
CDY12605 Canola extracellular, vacuole 33.99 7.26
CDY58867 Canola plasma membrane 33.99 7.2
Bra001790.1-P Field mustard plasma membrane 39.22 7.18
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 43.79 6.95
CDY36036 Canola plasma membrane 38.56 6.95
Bra034037.1-P Field mustard extracellular, vacuole 32.03 6.84
AT1G66980.2 Thale cress plasma membrane 47.06 6.28
CDY60415 Canola plasma membrane 41.18 5.31
CDY14478 Canola plasma membrane 45.1 5.25
PGSC0003DMT400033423 Potato extracellular 3.92 4.58
CDY72472 Canola mitochondrion 9.15 3.72
CDY45656 Canola extracellular, golgi, plasma membrane 6.54 1.53
CDY29432 Canola cytosol, peroxisome 3.92 1.01
CDY12599 Canola cytosol 2.61 0.98
CDX82242 Canola cytosol 2.61 0.9
Zm00001d022067_P001 Maize extracellular 1.96 0.81
Zm00001d012677_P012 Maize golgi 1.31 0.51
Zm00001d033187_P001 Maize plastid 1.31 0.48
CDX86807 Canola cytosol 0.0 0.0
CDY42328 Canola cytosol 0.0 0.0
PGSC0003DMT400033459 Potato endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1UniProt:A0A1D6J8H8ProteinID:AQK44224.1GO:GO:0003674GO:GO:0003824
GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_dom
InterPro:IPR017946InterPro:IPR030395InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF2
SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI000845170FEnsemblPlantsGene:Zm00001d025670EnsemblPlants:Zm00001d025670_P001EnsemblPlants:Zm00001d025670_T001
SEG:seg:::::
Description
Glycerophosphodiester phosphodiesterase GDPDL3
Coordinates
chr10:-:125787665..125792972
Molecular Weight (calculated)
16741.1 Da
IEP (calculated)
7.204
GRAVY (calculated)
0.084
Length
153 amino acids
Sequence
(BLAST)
001: MRSGRACSAL ASLLLLWLGV AAAQKASSWK TLSGKAPAIV AKGGFSGLFP DSSEYAYQFA LLASSPDTIL YCDVRLTKDE IGICLPDIKM DNCTNIPDFY
101: AQGQKSYLVN GVPTSGWFSV DYNGTELEQV TRMCYHIVLK IFSKMQESCT SFH
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.