Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
18260611
extracellular: 24083427 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G332500.1 | Wheat | golgi | 84.19 | 83.74 |
| TraesCS2B01G352000.1 | Wheat | extracellular, plasma membrane, vacuole | 83.92 | 83.47 |
| TraesCS2A01G330200.1 | Wheat | extracellular, plasma membrane, vacuole | 83.78 | 83.33 |
| HORVU2Hr1G081920.3 | Barley | plasma membrane | 83.38 | 82.93 |
| EES10974 | Sorghum | golgi | 80.0 | 79.04 |
| Zm00001d025670_P001 | Maize | mitochondrion | 15.95 | 77.12 |
| Os02t0588500-02 | Rice | extracellular | 70.54 | 69.69 |
| GSMUA_Achr8P25690_001 | Banana | plasma membrane | 62.84 | 61.18 |
| GSMUA_Achr9P12610_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 60.27 | 56.74 |
| Os09t0339800-00 | Rice | extracellular, golgi | 42.7 | 56.13 |
| Os08t0503200-01 | Rice | plasma membrane | 56.62 | 53.86 |
| Os12t0456700-01 | Rice | cytosol | 32.7 | 53.07 |
| GSMUA_Achr3P03920_001 | Banana | cytosol | 52.97 | 49.62 |
| Os02t0187300-01 | Rice | endoplasmic reticulum, extracellular | 2.03 | 41.67 |
| Os02t0187400-01 | Rice | plasma membrane | 39.32 | 41.39 |
| Os07t0602800-00 | Rice | mitochondrion | 12.43 | 24.66 |
| Os03t0603600-01 | Rice | extracellular | 12.3 | 23.27 |
| Os01t0763600-01 | Rice | extracellular | 11.76 | 22.25 |
| Os01t0763700-01 | Rice | plastid | 1.08 | 5.3 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | EntrezGene:4336129 | EMBL:AK070339 | ProteinID:BAF14974.1 | ProteinID:BAS89656.1 |
| ProteinID:CAE02867.2 | ProteinID:EEE61172.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:GP_PDE_dom | InterPro:IPR017946 | InterPro:IPR030395 |
| EnsemblPlantsGene:Os04g0472300 | EnsemblPlants:Os04t0472300-01 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 |
| PANTHER:PTHR43620:SF2 | UniProt:Q7XR26 | SUPFAM:SSF51695 | SignalP:SignalP-noTM | UniParc:UPI000021C618 | RefSeq:XP_015634118.1 |
| SEG:seg | : | : | : | : | : |
Description
PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os04t0472300-01);Hypothetical conserved gene. (Os04t0472300-02)
Coordinates
chr4:+:23606790..23610910
Molecular Weight (calculated)
81093.6 Da
IEP (calculated)
5.646
GRAVY (calculated)
-0.026
Length
740 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGSHVCSLV SSLVFLWLGV AAAQKASSWK TLSGNAPAII AKGGFSGIFP DSSEFAYQFA LIASSPDTIL YCDVRLTKDG LGICLPDIKM DNCTNIPDFY
101: QQGRKSYLVN GVSTAGWFSV DYNGTELGQV SLKQSIFSRS PRFDPSFFPI LAVEDIASKF KPPGMWLNVQ HDSFYSQFNL SMSNYIFSVS KRVIVDYISS
201: PEVSFLTKVS GKLSNNTRLV FRFLDESTIE PSTKQTYGSM LKNLTFVKTF ASGIIVPKKY IWPVSPDNYL EPHTSVVDDA HKAGLEIYAA DFANDFMFSY
301: NHSYDPLAEY LSFIDNGAFS VDGVLTDFPV TPSEAIGCFT NLKKSKTDHG KPLIISHNGA SGDYPACTDL AYQKAVDDGA DVIDCPVQLT KDGIPICMSS
401: INLMDDTTVA KSQFASQTAV IKDIESVLGV FTFNLTWDDI VKNLRPKIST PFSSFKLDRN PRYRNAGNFM RLSDFLDFTK DKDLSGIMIS VEHAAFVAEE
501: LGFDMVDSVI KTLDAAGYSN QTAQKVMIQS SNSSVLVKFK QQTKYDLVYM INEEVKDAAP SSLAAIKKFA DAVSVEGNSI FPENRHFTTY QTNLVESLQN
601: AGLPVYVYTL MNEFASQPYD FFSDATAQIN AYVQGAGVNG VITDFPATAR RYKLNTCMHM GNNTPSFMAP ARPGDLLQII SKPAQPPAMS PMPLLTGSDV
701: AEPPLPPART AQAPSLASRM QAHAAIVVTL AMLLACHPLV
101: QQGRKSYLVN GVSTAGWFSV DYNGTELGQV SLKQSIFSRS PRFDPSFFPI LAVEDIASKF KPPGMWLNVQ HDSFYSQFNL SMSNYIFSVS KRVIVDYISS
201: PEVSFLTKVS GKLSNNTRLV FRFLDESTIE PSTKQTYGSM LKNLTFVKTF ASGIIVPKKY IWPVSPDNYL EPHTSVVDDA HKAGLEIYAA DFANDFMFSY
301: NHSYDPLAEY LSFIDNGAFS VDGVLTDFPV TPSEAIGCFT NLKKSKTDHG KPLIISHNGA SGDYPACTDL AYQKAVDDGA DVIDCPVQLT KDGIPICMSS
401: INLMDDTTVA KSQFASQTAV IKDIESVLGV FTFNLTWDDI VKNLRPKIST PFSSFKLDRN PRYRNAGNFM RLSDFLDFTK DKDLSGIMIS VEHAAFVAEE
501: LGFDMVDSVI KTLDAAGYSN QTAQKVMIQS SNSSVLVKFK QQTKYDLVYM INEEVKDAAP SSLAAIKKFA DAVSVEGNSI FPENRHFTTY QTNLVESLQN
601: AGLPVYVYTL MNEFASQPYD FFSDATAQIN AYVQGAGVNG VITDFPATAR RYKLNTCMHM GNNTPSFMAP ARPGDLLQII SKPAQPPAMS PMPLLTGSDV
701: AEPPLPPART AQAPSLASRM QAHAAIVVTL AMLLACHPLV
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.