CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, vacuole

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60410	Canola	extracellular	36.75	44.85
CDY12601	Canola	extracellular	34.94	42.65
Zm00001d025670_P001	Maize	mitochondrion	28.31	30.72
CDY71959	Canola	extracellular, plastid, vacuole	56.02	28.35
GSMUA_AchrUn_...	Banana	extracellular	24.1	24.39
CDX86766	Canola	plasma membrane	91.57	24.01
CDX71386	Canola	extracellular	23.49	20.63
CDY58867	Canola	plasma membrane	74.1	17.04
CDY36746	Canola	plasma membrane	59.64	12.92
CDY11996	Canola	plasma membrane	58.43	12.55
CDY17323	Canola	plasma membrane	55.42	11.98
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	67.47	11.62
AT5G55480.1	Thale cress	plasma membrane	51.81	11.23
CDX92806	Canola	extracellular, plasma membrane, vacuole	42.17	9.78
CDY46687	Canola	extracellular, plasma membrane, vacuole	41.57	9.62
KRH46280	Soybean	cytosol	13.86	8.75
CDX89312	Canola	extracellular, plasma membrane, vacuole	39.76	8.72
CDX94294	Canola	extracellular, plasma membrane, vacuole	39.76	8.72
CDY61647	Canola	extracellular, plasma membrane	38.55	8.48
CDY13237	Canola	extracellular, plasma membrane, vacuole	38.55	8.43
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	37.95	8.32
PGSC0003DMT400057418	Potato	extracellular	36.14	7.97
Solyc07g065120.2.1	Tomato	extracellular	35.54	7.84
CDY11831	Canola	extracellular, vacuole	26.51	7.77
PGSC0003DMT400033463	Potato	extracellular, plasma membrane	34.94	7.7
Solyc12g014570.1.1	Tomato	nucleus	34.34	7.59
KRH14296	Soybean	endoplasmic reticulum	34.34	7.56
KRH73850	Soybean	endoplasmic reticulum	33.73	7.44
TraesCS6D01G189300.1	Wheat	unclear	33.13	7.36
TraesCS6B01G226700.2	Wheat	golgi	33.13	7.36
GSMUA_Achr8P25690_001	Banana	plasma membrane	33.13	7.24
TraesCS6A01G200600.1	Wheat	golgi	32.53	7.22
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	33.13	7.19
Zm00001d050917_P002	Maize	plasma membrane	32.53	7.17
GSMUA_Achr9P12610_001	Banana	endoplasmic reticulum, plasma membrane, plastid	33.73	7.12
HORVU2Hr1G081920.3	Barley	plasma membrane	31.93	7.12
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	31.93	7.12
TraesCS2D01G332500.1	Wheat	golgi	31.93	7.12
KRH46281	Soybean	extracellular, golgi, plasma membrane	32.53	7.1
EES10974	Sorghum	golgi	31.93	7.08
TraesCS7B01G147500.1	Wheat	unclear	32.53	6.99
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	31.33	6.99
EES05342	Sorghum	plasma membrane	31.33	6.91
TraesCS7A01G243900.3	Wheat	golgi	31.93	6.89
CDY12605	Canola	extracellular, vacuole	29.52	6.84
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	33.13	6.79
KRG98625	Soybean	extracellular	28.92	6.65
Zm00001d017036_P002	Maize	plasma membrane	30.72	6.61
KRH46279	Soybean	extracellular	28.92	6.6
GSMUA_Achr3P03920_001	Banana	cytosol	31.33	6.58
Zm00001d031412_P001	Maize	extracellular	29.52	6.58
KRH46282	Soybean	extracellular, plasma membrane	30.12	6.57
CDY36036	Canola	plasma membrane	33.13	6.48
KXG36695	Sorghum	plasma membrane	30.12	6.45
Zm00001d052875_P001	Maize	mitochondrion	29.52	6.31
CDY19634	Canola	plasma membrane	27.11	6.2
Zm00001d022153_P006	Maize	extracellular, mitochondrion	28.92	6.18
GSMUA_Achr1P16520_001	Banana	extracellular, plasma membrane	27.71	6.13
CDX88656	Canola	plasma membrane	26.51	5.68
OQU80956	Sorghum	cytosol	30.12	5.65
CDY02800	Canola	extracellular, plasma membrane, plastid	25.3	5.61
KRG98622	Soybean	extracellular, golgi, plasma membrane	25.3	5.61
Os02t0187300-01	Rice	endoplasmic reticulum, extracellular	1.2	5.56
CDY14478	Canola	plasma membrane	43.37	5.48
CDY32720	Canola	extracellular, plastid, vacuole	24.7	5.45
CDY02788	Canola	plasma membrane	24.1	5.37
CDY32730	Canola	plasma membrane	24.1	5.37
CDY60415	Canola	plasma membrane	37.95	5.31
CDY43885	Canola	extracellular, golgi, plasma membrane	22.89	5.06
PGSC0003DMT400033423	Potato	extracellular	2.41	3.05
CDY72472	Canola	mitochondrion	4.82	2.13
CDY45656	Canola	extracellular, golgi, plasma membrane	7.83	1.99
CDY29432	Canola	cytosol, peroxisome	4.22	1.17
CDX85814	Canola	extracellular	1.2	1.02
CDX82242	Canola	cytosol	1.81	0.68
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	1.2	0.48
CDX68196	Canola	golgi	0.6	0.25
CDX99041	Canola	extracellular	0.0	0.0
CDY42328	Canola	cytosol	0.0	0.0
CDY11071	Canola	extracellular, golgi	0.0	0.0
CDX73068	Canola	extracellular	0.0	0.0
CDX69980	Canola	extracellular, golgi, vacuole	0.0	0.0
CDY11832	Canola	cytosol, peroxisome, plastid	0.0	0.0
CDX86807	Canola	cytosol	0.0	0.0
CDY12599	Canola	cytosol	0.0	0.0
PGSC0003DMT400033459	Potato	endoplasmic reticulum	0.0	0.0
CDX85815	Canola	mitochondrion	0.0	0.0
CDX68195	Canola	peroxisome	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078DC07	EnsemblPlants:CDX86765	ProteinID:CDX86765	ProteinID:CDX86765.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00145487001	InterPro:IPR017946	InterPro:IPR030395	InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF1	SUPFAM:SSF51695	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EE8AB8	SEG:seg	:	:	:	:

Description

BnaA09g21550D

Coordinates

chrLK031847:-:510452..511338

Molecular Weight (calculated)

18247.2 Da

IEP (calculated)

9.726

GRAVY (calculated)

0.113

Length

166 amino acids

Sequence
(BLAST)

001: MITCMQDNPS MFRLRASKFL LLSVLILSQF LSTQLLAQRS KSPWQTLTGE APLIIARGGF SGLFPDSSVT AYSFVSATSV PDAVLWCDVQ LTKDGVGISF
101: PDVTMTGSPL TSPPKISKAC SGYCHGHRHS MTTETLFHQL RTYNIISNLR GFGLMFSTTR SMRNTI

Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)

001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL

Arabidopsis Description

GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.