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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46687 Canola extracellular, plasma membrane, vacuole 98.04 97.91
CDX94294 Canola extracellular, plasma membrane, vacuole 85.47 80.85
CDX89312 Canola extracellular, plasma membrane, vacuole 85.2 80.58
AT4G26690.1 Thale cress extracellular, vacuole 80.87 76.28
CDX86807 Canola cytosol 23.46 73.04
CDY61647 Canola extracellular, plasma membrane 76.12 72.19
CDY12599 Canola cytosol 40.78 71.57
CDY42328 Canola cytosol 25.56 70.93
CDY13237 Canola extracellular, plasma membrane, vacuole 74.44 70.22
CDY12605 Canola extracellular, vacuole 69.97 69.97
CDY17323 Canola plasma membrane 71.65 66.8
CDY60410 Canola extracellular 12.57 66.18
CDY45656 Canola extracellular, golgi, plasma membrane 60.34 66.16
CDY12601 Canola extracellular 12.43 65.44
CDY72472 Canola mitochondrion 34.36 65.43
CDY36746 Canola plasma membrane 68.16 63.71
CDY11996 Canola plasma membrane 66.06 61.19
PGSC0003DMT400033423 Potato extracellular 10.47 57.25
CDX86766 Canola plasma membrane 49.16 55.61
CDY71959 Canola extracellular, plastid, vacuole 25.0 54.57
CDY58867 Canola plasma membrane 54.89 54.43
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 55.87 52.84
PGSC0003DMT400057418 Potato extracellular 55.45 52.72
Solyc07g065120.2.1 Tomato extracellular 55.03 52.32
KRH73850 Soybean endoplasmic reticulum 54.75 52.06
Solyc12g014570.1.1 Tomato nucleus 54.47 51.93
KRH14296 Soybean endoplasmic reticulum 54.33 51.59
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.77 51.13
KRH46281 Soybean extracellular, golgi, plasma membrane 53.63 50.46
KRH46279 Soybean extracellular 50.56 49.79
KRG98625 Soybean extracellular 50.14 49.72
KRH46282 Soybean extracellular, plasma membrane 52.37 49.28
PGSC0003DMT400033459 Potato endoplasmic reticulum 17.74 49.03
KRG98622 Soybean extracellular, golgi, plasma membrane 49.72 47.53
CDX82242 Canola cytosol 29.33 47.4
GSMUA_Achr8P25690_001 Banana plasma membrane 49.58 46.71
CDY19634 Canola plasma membrane 47.21 46.56
CDY29432 Canola cytosol, peroxisome 38.41 46.14
GSMUA_AchrUn_... Banana extracellular 10.47 45.73
TraesCS6A01G200600.1 Wheat golgi 47.21 45.19
HORVU2Hr1G081920.3 Barley plasma membrane 46.79 45.03
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 46.79 45.03
TraesCS6D01G189300.1 Wheat unclear 46.93 44.98
TraesCS2D01G332500.1 Wheat golgi 46.51 44.76
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 46.51 44.76
TraesCS6B01G226700.2 Wheat golgi 46.51 44.58
EES05342 Sorghum plasma membrane 46.79 44.49
Zm00001d050917_P002 Maize plasma membrane 46.79 44.49
KRH46280 Soybean cytosol 16.34 44.49
EES10974 Sorghum golgi 46.51 44.46
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 46.51 44.34
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 47.07 44.05
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 48.18 43.89
Zm00001d017036_P002 Maize plasma membrane 46.37 43.01
Zm00001d025670_P001 Maize mitochondrion 9.08 42.48
CDX86765 Canola extracellular, mitochondrion, vacuole 9.78 42.17
TraesCS7A01G243900.3 Wheat golgi 45.25 42.13
CDY32720 Canola extracellular, plastid, vacuole 43.99 41.89
TraesCS7B01G147500.1 Wheat unclear 44.97 41.71
CDY02800 Canola extracellular, plasma membrane, plastid 43.16 41.31
CDY43885 Canola extracellular, golgi, plasma membrane 43.3 41.28
KXG36695 Sorghum plasma membrane 44.55 41.16
Zm00001d052875_P001 Maize mitochondrion 44.13 40.72
CDY60415 Canola plasma membrane 67.04 40.47
CDY02788 Canola plasma membrane 42.04 40.4
CDY32730 Canola plasma membrane 41.76 40.13
CDX88656 Canola plasma membrane 43.44 40.13
GSMUA_Achr3P03920_001 Banana cytosol 44.13 40.0
Zm00001d022153_P006 Maize extracellular, mitochondrion 43.3 39.9
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 44.97 39.75
CDY36036 Canola plasma membrane 47.07 39.69
CDY11831 Canola extracellular, vacuole 31.15 39.4
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.96 38.89
Zm00001d031412_P001 Maize extracellular 40.36 38.79
CDY14478 Canola plasma membrane 71.09 38.74
CDY11832 Canola cytosol, peroxisome, plastid 7.82 36.6
OQU80956 Sorghum cytosol 44.97 36.38
CDX71386 Canola extracellular 9.36 35.45
CDX69980 Canola extracellular, golgi, vacuole 11.31 21.77
CDY11071 Canola extracellular, golgi 11.73 21.48
CDX99041 Canola extracellular 11.17 21.45
CDX73068 Canola extracellular 11.45 20.76
CDX68196 Canola golgi 11.45 20.65
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 12.01 20.48
CDX85814 Canola extracellular 5.31 19.39
CDX68195 Canola peroxisome 11.03 19.17
CDX85815 Canola mitochondrion 6.56 16.26
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078DU53EnsemblPlants:CDX92806ProteinID:CDX92806ProteinID:CDX92806.1
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00154635001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
SignalP:SignalP-noTMUniParc:UPI0004EE83C1SEG:seg:::
Description
BnaC07g40640D
Coordinates
chrLK031873:+:883195..886738
Molecular Weight (calculated)
78044.6 Da
IEP (calculated)
4.770
GRAVY (calculated)
-0.037
Length
716 amino acids
Sequence
(BLAST)
001: MRGLLLLCGV VLIQLLAVQT DAQRSKSKWQ TLTGFSPRVI ARGGFSGLFP DSSIDAYNFA MLTSVEDVVL WCDLQLTKDG AGICFPGLTM SNASNIEAAY
101: PNRTNTYLVN GVSTQGWFTI DFSLKDLNKV NLIRGILSRS ERFDGNGYSI LTVQDVNTEL KPQGLWLNVQ HEAFYAQHNL SMTTFLTTTS KTIIIDFISS
201: PEVNFFKKIA GRFGRILVPK SYVLPLDDKQ YLLPSTSLVQ DAHKAGLEVF VSGFANDVDI AHDYSYDPVS EYLSFVDNGN FSVDGVLSDF PISASASVEC
301: FSHMGRNATK QVDFLVISKN GASGDYPGCT DLAYAKAIKD GADVIDCSVQ MSSDGTPFCS SSIDLGNTTM VAQTPLRNRS TNVPELSSLG GIYTFSLTWP
401: EIQTLTPAIS NPYRTYNMFR NPNERNAGKL VSLTEFLNLA KNSTSLSGVL ISVENAAYLR ENQGIDVVKA VLDTLTQTGY TNITTKKVMI QSTNSSVLLD
501: FKKQSRYETV YKVEETIRDI LDSAIEDIKA FASAVVIVKS SVFPDSEGFV TEQTNVVERL QKSQLPVYVE LFQNEFVSQP YDFFSDANVE INSYVTGAGV
601: NGTVTEFPYT AARFRRNRCL GSKETPPYMA PVQPGGLLQV VNHASLPPAE APNPVFTDAD VTEPPLPPVT AKAPTSTPGT PSEPSTNAPA PSGQTRLTLS
701: LLLSVFPMAI ASLLLL
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.