Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58170.1 | CDX89318 | AT4G26630.1 | 25387881 |
| AT5G58170.1 | CDX94304 | AT4G26630.1 | 25387881 |
| AT5G58170.1 | CDX97358 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006785.1-P | Field mustard | extracellular, plasma membrane | 99.23 | 99.23 |
| CDY11832 | Canola | cytosol, peroxisome, plastid | 18.84 | 95.42 |
| CDY11831 | Canola | extracellular, vacuole | 65.42 | 89.58 |
| CDX71386 | Canola | extracellular | 21.55 | 88.36 |
| CDY32730 | Canola | plasma membrane | 84.9 | 88.32 |
| CDY02788 | Canola | plasma membrane | 84.13 | 87.52 |
| CDY43885 | Canola | extracellular, golgi, plasma membrane | 82.06 | 84.69 |
| AT5G58170.1 | Thale cress | extracellular, plasma membrane | 81.42 | 84.13 |
| AT5G58050.1 | Thale cress | extracellular, plasma membrane | 80.52 | 82.87 |
| CDY02800 | Canola | extracellular, plasma membrane, plastid | 76.52 | 79.28 |
| CDY32720 | Canola | extracellular, plastid, vacuole | 76.52 | 78.86 |
| VIT_11s0206g00140.t01 | Wine grape | plasma membrane | 58.45 | 60.4 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, peroxisome | 41.81 | 56.94 |
| GSMUA_Achr4P09430_001 | Banana | extracellular | 49.68 | 55.96 |
| KRH20083 | Soybean | plasma membrane | 51.48 | 52.23 |
| KRH03081 | Soybean | extracellular, plasma membrane | 50.71 | 51.44 |
| CDY72472 | Canola | mitochondrion | 22.71 | 46.81 |
| PGSC0003DMT400008464 | Potato | cytosol | 43.48 | 45.66 |
| PGSC0003DMT400008461 | Potato | cytosol | 44.9 | 45.25 |
| CDY61647 | Canola | extracellular, plasma membrane | 43.87 | 45.03 |
| Solyc02g014490.2.1 | Tomato | unclear | 41.94 | 45.01 |
| CDY13237 | Canola | extracellular, plasma membrane, vacuole | 43.35 | 44.27 |
| CDX94294 | Canola | extracellular, plasma membrane, vacuole | 43.23 | 44.25 |
| CDX89312 | Canola | extracellular, plasma membrane, vacuole | 43.1 | 44.12 |
| CDY45656 | Canola | extracellular, golgi, plasma membrane | 37.16 | 44.1 |
| Solyc02g014530.2.1 | Tomato | unclear | 45.16 | 44.03 |
| CDY12605 | Canola | extracellular, vacuole | 40.65 | 43.99 |
| CDY46687 | Canola | extracellular, plasma membrane, vacuole | 40.65 | 43.93 |
| CDX92806 | Canola | extracellular, plasma membrane, vacuole | 40.13 | 43.44 |
| CDY17323 | Canola | plasma membrane | 42.97 | 43.36 |
| CDY71959 | Canola | extracellular, plastid, vacuole | 17.81 | 42.07 |
| CDY36746 | Canola | plasma membrane | 41.16 | 41.64 |
| CDY29432 | Canola | cytosol, peroxisome | 32.0 | 41.61 |
| CDY12599 | Canola | cytosol | 21.55 | 40.93 |
| CDY19634 | Canola | plasma membrane | 38.19 | 40.77 |
| CDY11996 | Canola | plasma membrane | 40.39 | 40.49 |
| CDY60410 | Canola | extracellular | 7.1 | 40.44 |
| CDY58867 | Canola | plasma membrane | 37.16 | 39.89 |
| CDY12601 | Canola | extracellular | 6.97 | 39.71 |
| CDX82242 | Canola | cytosol | 21.94 | 38.37 |
| CDY42328 | Canola | cytosol | 12.65 | 37.98 |
| CDX86766 | Canola | plasma membrane | 30.45 | 37.28 |
| CDX86807 | Canola | cytosol | 10.84 | 36.52 |
| CDY36036 | Canola | plasma membrane | 38.19 | 34.86 |
| CDX86765 | Canola | extracellular, mitochondrion, vacuole | 5.68 | 26.51 |
| CDY14478 | Canola | plasma membrane | 42.45 | 25.04 |
| CDY60415 | Canola | plasma membrane | 37.16 | 24.28 |
| CDY11071 | Canola | extracellular, golgi | 11.23 | 22.25 |
| CDX68196 | Canola | golgi | 11.23 | 21.91 |
| CDX73068 | Canola | extracellular | 11.1 | 21.77 |
| CDX69980 | Canola | extracellular, golgi, vacuole | 10.32 | 21.51 |
| CDX96524 | Canola | golgi, mitochondrion, peroxisome, plastid | 11.61 | 21.43 |
| CDX85814 | Canola | extracellular | 5.29 | 20.92 |
| CDX68195 | Canola | peroxisome | 11.1 | 20.87 |
| CDX99041 | Canola | extracellular | 9.94 | 20.64 |
| CDX85815 | Canola | mitochondrion | 6.71 | 17.99 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | GO:A0A078DHD4 | EnsemblPlants:CDX88656 | ProteinID:CDX88656 | ProteinID:CDX88656.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:GP_PDE_dom | EnsemblPlantsGene:GSBRNA2T00148699001 | InterPro:IPR017946 | InterPro:IPR030395 | PFAM:PF03009 |
| InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF3 | SUPFAM:SSF51695 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EE8CB7 | SEG:seg | : | : | : |
Description
BnaA03g09930D
Coordinates
chrLK031856:-:361324..365237
Molecular Weight (calculated)
83452.1 Da
IEP (calculated)
4.975
GRAVY (calculated)
0.021
Length
775 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRSFIIFSL FLHSCVAAPQ TPTAAAAVPA KKWLTLNGQE PGVVARGGFS GLFPESSASA NAFAISTSSP GLTMLCNLQM TKDGVGICLP DIRLDNSTTI
101: STLFPKAQKT YKVNGQDLKG WFALDYSADT IFSNVSLVQN IFSRPSIFNG QMPISAVEDV LGTKPPKFWL SVQYDSFYVE HKLSAAEYLK TLRFRGITFI
201: SSPEIAFLKS IGMDAGMSKT KLIFEFKDPE AIEPTTNKKY SEFLLDLAAI KAFASGVLVP KDYIWPLDSA NYLKPASTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGFITD FPPTASQAIS CLSHQQGNLP KANHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDSADLTTST TAMTTFMSRA TSVPEIQPTN GIFSFDLTWA EIQSLKPQIL SPFLTKGGFQ RNPANKNAGK FITLVDFLEF SKEKAVTGVL INIEANTTFQ
501: KYTFQDNFTD DALFCLQNAA YLASKKGLGI VDTVQSAITK STLDKQLTQK VLIQSDDSSV LSSFAAVPPY TRVLTIDKEI GDAPKPSIDE IKKHAEAVNL
601: KRSSLVTTSK NFATGKTNVV EEMHKGNVSV YVSVLRNEYL SIAFDYFSDP TVEIATFIAG NSVDGVVTEF PVTATRYLRS PCSDLNKEQP YAILPVEAGA
701: LLSVAAKEAQ PPASAPNPPL DARDVIDPPL PPIANIVSAN ASGEAPGHSG TIATTADLGL SLVAILVLGL LFAAE
101: STLFPKAQKT YKVNGQDLKG WFALDYSADT IFSNVSLVQN IFSRPSIFNG QMPISAVEDV LGTKPPKFWL SVQYDSFYVE HKLSAAEYLK TLRFRGITFI
201: SSPEIAFLKS IGMDAGMSKT KLIFEFKDPE AIEPTTNKKY SEFLLDLAAI KAFASGVLVP KDYIWPLDSA NYLKPASTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGFITD FPPTASQAIS CLSHQQGNLP KANHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDSADLTTST TAMTTFMSRA TSVPEIQPTN GIFSFDLTWA EIQSLKPQIL SPFLTKGGFQ RNPANKNAGK FITLVDFLEF SKEKAVTGVL INIEANTTFQ
501: KYTFQDNFTD DALFCLQNAA YLASKKGLGI VDTVQSAITK STLDKQLTQK VLIQSDDSSV LSSFAAVPPY TRVLTIDKEI GDAPKPSIDE IKKHAEAVNL
601: KRSSLVTTSK NFATGKTNVV EEMHKGNVSV YVSVLRNEYL SIAFDYFSDP TVEIATFIAG NSVDGVVTEF PVTATRYLRS PCSDLNKEQP YAILPVEAGA
701: LLSVAAKEAQ PPASAPNPPL DARDVIDPPL PPIANIVSAN ASGEAPGHSG TIATTADLGL SLVAILVLGL LFAAE
001: MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
Arabidopsis Description
GDPDL7Glycerophosphodiester phosphodiesterase GDPDL7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN0]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.