Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G58050.1 | Thale cress | extracellular, plasma membrane | 91.47 | 91.1 |
| CDY43885 | Canola | extracellular, golgi, plasma membrane | 84.27 | 84.15 |
| Bra002676.1-P | Field mustard | extracellular, golgi, plasma membrane | 84.13 | 83.58 |
| CDX88656 | Canola | plasma membrane | 84.13 | 81.42 |
| Bra006785.1-P | Field mustard | extracellular, plasma membrane | 84.0 | 81.29 |
| CDY11832 | Canola | cytosol, peroxisome, plastid | 15.33 | 75.16 |
| VIT_11s0206g00140.t01 | Wine grape | plasma membrane | 59.6 | 59.6 |
| GSMUA_Achr4P09430_001 | Banana | extracellular | 51.73 | 56.4 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, peroxisome | 42.0 | 55.36 |
| KRH20083 | Soybean | plasma membrane | 53.2 | 52.23 |
| KRH03081 | Soybean | extracellular, plasma membrane | 51.87 | 50.92 |
| Os02t0187400-01 | Rice | plasma membrane | 47.33 | 50.5 |
| Zm00001d015609_P002 | Maize | plasma membrane | 50.0 | 49.28 |
| KXG29647 | Sorghum | extracellular, plasma membrane | 48.93 | 48.74 |
| TraesCS6A01G174100.1 | Wheat | extracellular, plasma membrane, vacuole | 48.53 | 48.6 |
| TraesCS6D01G163200.1 | Wheat | extracellular, plasma membrane | 48.27 | 48.33 |
| TraesCS6B01G202700.1 | Wheat | extracellular, plasma membrane | 48.13 | 48.2 |
| EER90089 | Sorghum | extracellular, plasma membrane | 47.33 | 46.65 |
| TraesCS1B01G368600.1 | Wheat | extracellular, plasma membrane | 46.93 | 46.25 |
| TraesCS1D01G357000.1 | Wheat | extracellular, plasma membrane | 46.8 | 46.12 |
| TraesCS1A01G353200.1 | Wheat | extracellular, plasma membrane | 46.67 | 45.99 |
| PGSC0003DMT400008464 | Potato | cytosol | 45.2 | 45.94 |
| Solyc02g014490.2.1 | Tomato | unclear | 43.6 | 45.29 |
| PGSC0003DMT400008461 | Potato | cytosol | 46.4 | 45.25 |
| Solyc02g014530.2.1 | Tomato | unclear | 46.93 | 44.28 |
| AT4G26690.1 | Thale cress | extracellular, vacuole | 44.53 | 44.01 |
| AT1G66970.2 | Thale cress | plasma membrane | 45.73 | 43.69 |
| HORVU1Hr1G080970.22 | Barley | extracellular, plasma membrane | 46.4 | 42.86 |
| AT5G55480.1 | Thale cress | plasma membrane | 43.6 | 42.69 |
| AT3G20520.1 | Thale cress | plasma membrane | 38.8 | 39.92 |
| AT1G66980.2 | Thale cress | plasma membrane | 42.67 | 27.9 |
| AT1G74210.1 | Thale cress | extracellular | 11.6 | 22.19 |
| AT5G08030.2 | Thale cress | golgi | 10.53 | 20.41 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | EntrezGene:835929 | UniProt:A0A178UC37 | ProteinID:AED97007.1 | EMBL:AK118200 |
| ArrayExpress:AT5G58170 | EnsemblPlantsGene:AT5G58170 | RefSeq:AT5G58170 | TAIR:AT5G58170 | RefSeq:AT5G58170-TAIR-G | EnsemblPlants:AT5G58170.1 |
| TAIR:AT5G58170.1 | Unigene:At.29293 | ProteinID:BAA96908.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005975 | GO:GO:0006071 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008889 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0031225 |
| GO:GO:0048046 | InterPro:GP_PDE_dom | InterPro:IPR017946 | InterPro:IPR030395 | RefSeq:NP_200625.1 | ProteinID:OAO90717.1 |
| PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl | PO:PO:0000037 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF3 |
| UniProt:Q9LVN0 | SUPFAM:SSF51695 | Symbol:SVL5 | SignalP:SignalP-noTM | UniParc:UPI00000A16A4 | SEG:seg |
Description
GDPDL7Glycerophosphodiester phosphodiesterase GDPDL7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN0]
Coordinates
chr5:-:23540049..23543345
Molecular Weight (calculated)
80042.1 Da
IEP (calculated)
4.898
GRAVY (calculated)
0.027
Length
750 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.