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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • golgi 4
  • plasma membrane 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009316.1-P Field mustard extracellular, vacuole 86.05 89.52
CDX69980 Canola extracellular, golgi, vacuole 85.79 89.25
CDX99041 Canola extracellular 85.79 89.01
GSMUA_Achr6P34970_001 Banana extracellular, plasma membrane 70.8 70.44
VIT_17s0000g07450.t01 Wine grape extracellular, golgi 71.58 70.13
KRH03139 Soybean extracellular, golgi 70.28 70.1
KRH56805 Soybean nucleus 70.54 69.64
AT1G74210.1 Thale cress extracellular 70.28 69.39
Solyc06g069470.2.1 Tomato extracellular 69.25 68.54
PGSC0003DMT400010411 Potato extracellular, golgi 68.48 67.77
Zm00001d012677_P012 Maize golgi 68.22 67.52
TraesCS3A01G302700.1 Wheat extracellular, golgi 68.22 67.52
EES01511 Sorghum extracellular, golgi 67.96 67.26
HORVU3Hr1G073870.1 Barley extracellular, golgi 67.96 67.26
TraesCS3B01G333600.1 Wheat extracellular, golgi 67.7 67.01
TraesCS3D01G299100.1 Wheat extracellular, golgi 67.7 67.01
Os01t0763600-01 Rice extracellular 67.18 66.5
AT5G58170.1 Thale cress extracellular, plasma membrane 20.41 10.53
AT1G66970.2 Thale cress plasma membrane 20.93 10.32
AT4G26690.1 Thale cress extracellular, vacuole 20.16 10.28
AT3G20520.1 Thale cress plasma membrane 19.12 10.15
AT5G58050.1 Thale cress extracellular, plasma membrane 19.64 10.09
AT5G55480.1 Thale cress plasma membrane 18.86 9.53
AT1G66980.2 Thale cress plasma membrane 19.38 6.54
Os01t0763700-01 Rice plastid 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EntrezGene:830697UniProt:A0A1P8BCR6ProteinID:AED91236.1ProteinID:ANM69393.1
ArrayExpress:AT5G08030EnsemblPlantsGene:AT5G08030RefSeq:AT5G08030TAIR:AT5G08030RefSeq:AT5G08030-TAIR-GEnsemblPlants:AT5G08030.2
Unigene:At.636EMBL:BT023450ProteinID:CAB62615.1GO:GO:0003674GO:GO:0003824GO:GO:0005975
GO:GO:0006071GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0008889
GO:GO:0009987GO:GO:0016787InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395RefSeq:NP_001331075.1
RefSeq:NP_196420.1ProteinID:OAO90642.1PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620
PANTHER:PTHR43620:SF5SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI000848804FSEG:seg:
Description
PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
Coordinates
chr5:-:2575025..2576819
Molecular Weight (calculated)
44625.0 Da
IEP (calculated)
6.062
GRAVY (calculated)
-0.450
Length
387 amino acids
Sequence
(BLAST)
001: MQCGRWRNFS SSNSVMAFKY LLPLLLLSLL VANCASRPLY RLPSEAKHAT KKPLQTSRPY NLAHRGSNGE LPEETAPAYM RAIEEGADFI ETDILSSKDG
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.