Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- golgi 4
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra009316.1-P | Field mustard | extracellular, vacuole | 86.05 | 89.52 |
CDX69980 | Canola | extracellular, golgi, vacuole | 85.79 | 89.25 |
CDX99041 | Canola | extracellular | 85.79 | 89.01 |
GSMUA_Achr6P34970_001 | Banana | extracellular, plasma membrane | 70.8 | 70.44 |
VIT_17s0000g07450.t01 | Wine grape | extracellular, golgi | 71.58 | 70.13 |
KRH03139 | Soybean | extracellular, golgi | 70.28 | 70.1 |
KRH56805 | Soybean | nucleus | 70.54 | 69.64 |
AT1G74210.1 | Thale cress | extracellular | 70.28 | 69.39 |
Solyc06g069470.2.1 | Tomato | extracellular | 69.25 | 68.54 |
PGSC0003DMT400010411 | Potato | extracellular, golgi | 68.48 | 67.77 |
Zm00001d012677_P012 | Maize | golgi | 68.22 | 67.52 |
TraesCS3A01G302700.1 | Wheat | extracellular, golgi | 68.22 | 67.52 |
EES01511 | Sorghum | extracellular, golgi | 67.96 | 67.26 |
HORVU3Hr1G073870.1 | Barley | extracellular, golgi | 67.96 | 67.26 |
TraesCS3B01G333600.1 | Wheat | extracellular, golgi | 67.7 | 67.01 |
TraesCS3D01G299100.1 | Wheat | extracellular, golgi | 67.7 | 67.01 |
Os01t0763600-01 | Rice | extracellular | 67.18 | 66.5 |
AT5G58170.1 | Thale cress | extracellular, plasma membrane | 20.41 | 10.53 |
AT1G66970.2 | Thale cress | plasma membrane | 20.93 | 10.32 |
AT4G26690.1 | Thale cress | extracellular, vacuole | 20.16 | 10.28 |
AT3G20520.1 | Thale cress | plasma membrane | 19.12 | 10.15 |
AT5G58050.1 | Thale cress | extracellular, plasma membrane | 19.64 | 10.09 |
AT5G55480.1 | Thale cress | plasma membrane | 18.86 | 9.53 |
AT1G66980.2 | Thale cress | plasma membrane | 19.38 | 6.54 |
Os01t0763700-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
Gene3D:3.20.20.190 | MapMan:35.1 | EntrezGene:830697 | UniProt:A0A1P8BCR6 | ProteinID:AED91236.1 | ProteinID:ANM69393.1 |
ArrayExpress:AT5G08030 | EnsemblPlantsGene:AT5G08030 | RefSeq:AT5G08030 | TAIR:AT5G08030 | RefSeq:AT5G08030-TAIR-G | EnsemblPlants:AT5G08030.2 |
Unigene:At.636 | EMBL:BT023450 | ProteinID:CAB62615.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
GO:GO:0006071 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008889 |
GO:GO:0009987 | GO:GO:0016787 | InterPro:GP_PDE_dom | InterPro:IPR017946 | InterPro:IPR030395 | RefSeq:NP_001331075.1 |
RefSeq:NP_196420.1 | ProteinID:OAO90642.1 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 |
PANTHER:PTHR43620:SF5 | SUPFAM:SSF51695 | SignalP:SignalP-noTM | UniParc:UPI000848804F | SEG:seg | : |
Description
PLC-like phosphodiesterases superfamily protein [Source:TAIR;Acc:AT5G08030]
Coordinates
chr5:-:2575025..2576819
Molecular Weight (calculated)
44625.0 Da
IEP (calculated)
6.062
GRAVY (calculated)
-0.450
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MQCGRWRNFS SSNSVMAFKY LLPLLLLSLL VANCASRPLY RLPSEAKHAT KKPLQTSRPY NLAHRGSNGE LPEETAPAYM RAIEEGADFI ETDILSSKDG
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ
101: VLICHHDVNL DDTTDVADHK EFADRKRTYE VQGMNMTGFF TVDFTLKELK TLGAKQRYPF RDQQYNGKFP IITFDEYISI ALDAPRVVGI YPEIKNPVFM
201: NQQVKWADGK KFEDKFVETL KKYGYKGSYL SEDWLKQPIF IQSFAATSLV YISNMTDSPK LFLIDDVTIL TEDTNKTYAE ITSDAYLDYI KPYVIGIGPW
301: KDTIVPVNNN RLMTPTDLVA RAHSRNLQVH PYTYRNENQF LHLEFNQDPY LEYDYWLNKI GVDGLFTDFT GSLHNYQELK SPLPQQQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.