Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069470.2.1 | Tomato | extracellular | 97.44 | 97.44 |
| VIT_17s0000g07450.t01 | Wine grape | extracellular, golgi | 75.96 | 75.19 |
| GSMUA_Achr6P34970_001 | Banana | extracellular, plasma membrane | 74.17 | 74.55 |
| KRH03139 | Soybean | extracellular, golgi | 72.63 | 73.2 |
| KRH56805 | Soybean | nucleus | 73.15 | 72.96 |
| Zm00001d012677_P012 | Maize | golgi | 71.61 | 71.61 |
| Os01t0763600-01 | Rice | extracellular | 70.59 | 70.59 |
| Bra009316.1-P | Field mustard | extracellular, vacuole | 67.01 | 70.43 |
| HORVU3Hr1G073870.1 | Barley | extracellular, golgi | 70.33 | 70.33 |
| CDX69980 | Canola | extracellular, golgi, vacuole | 66.75 | 70.16 |
| TraesCS3B01G333600.1 | Wheat | extracellular, golgi | 70.08 | 70.08 |
| TraesCS3D01G299100.1 | Wheat | extracellular, golgi | 70.08 | 70.08 |
| EES01511 | Sorghum | extracellular, golgi | 70.08 | 70.08 |
| CDX99041 | Canola | extracellular | 66.75 | 69.97 |
| AT1G74210.1 | Thale cress | extracellular | 70.08 | 69.9 |
| CDX73068 | Canola | extracellular | 70.08 | 69.37 |
| TraesCS3A01G302700.1 | Wheat | extracellular, golgi | 69.31 | 69.31 |
| Bra003814.1-P | Field mustard | golgi | 68.54 | 68.54 |
| AT5G08030.2 | Thale cress | golgi | 67.77 | 68.48 |
| Bra015928.1-P | Field mustard | extracellular, golgi, vacuole | 68.8 | 68.45 |
| CDY11071 | Canola | extracellular, golgi | 67.52 | 67.52 |
| CDX68196 | Canola | golgi | 67.77 | 66.75 |
| Bra003813.1-P | Field mustard | cytosol | 68.54 | 65.05 |
| CDX68195 | Canola | peroxisome | 68.29 | 64.81 |
| CDX96524 | Canola | golgi, mitochondrion, peroxisome, plastid | 69.31 | 64.52 |
| CDX85815 | Canola | mitochondrion | 43.73 | 59.17 |
| CDX85814 | Canola | extracellular | 27.62 | 55.1 |
| PGSC0003DMT400033423 | Potato | extracellular | 6.39 | 19.08 |
| PGSC0003DMT400033459 | Potato | endoplasmic reticulum | 11.0 | 16.6 |
| PGSC0003DMT400008461 | Potato | cytosol | 21.74 | 11.05 |
| PGSC0003DMT400057418 | Potato | extracellular | 20.97 | 10.89 |
| PGSC0003DMT400033463 | Potato | extracellular, plasma membrane | 20.97 | 10.89 |
| PGSC0003DMT400008464 | Potato | cytosol | 19.95 | 10.57 |
| Os01t0763700-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:102605105 | Gene3D:3.20.20.190 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:GP_PDE_dom | InterPro:IPR017946 |
| InterPro:IPR030395 | UniProt:M0ZY03 | PFAM:PF03009 | EnsemblPlantsGene:PGSC0003DMG400004067 | PGSC:PGSC0003DMG400004067 | EnsemblPlants:PGSC0003DMT400010411 |
| InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF5 | SUPFAM:SSF51695 | SignalP:SignalP-noTM |
| UniParc:UPI000296306B | RefSeq:XP_006354752.1 | SEG:seg | : | : | : |
Description
Glycerophosphoryl diester phosphodiesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400004067]
Coordinates
chr6:+:51263704..51272185
Molecular Weight (calculated)
45271.5 Da
IEP (calculated)
5.626
GRAVY (calculated)
-0.441
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSPSVVPYI FLLLLVGCSA RPLYPLPGRR NDRNKQPLQT FRAYNIAHRG SNGEIPEETA AAYMRAIEEG TDFIETDILA SKDGALICFH DVILDDMTDI
101: ANHKEFADRK RTYDVQGVNT TGYFLVDFTL EELKLLRVKQ RYPFRDQQYN GEFSIITFEE FISIALDAHR VVGIYPEIKN PVLINQHVKW PGGKKFEDKF
201: VETLKKYGYN GSYMSKQWLK QPAFIQSFAP TSLIYISNQT DLPKIFLIDD TNTPTQDTNQ SYWEITSDGY LDYIKEYVVG IGPWKDTIVP CSSNYMQTPS
301: DLVARAHARN LQVHPYTFRN ENQFVHFNFS EDPYNEFDYW INKMGVDGLF TDFTGSLHHY QEWTNPFASG EKEATRLLNK IELMLSKFKY T
101: ANHKEFADRK RTYDVQGVNT TGYFLVDFTL EELKLLRVKQ RYPFRDQQYN GEFSIITFEE FISIALDAHR VVGIYPEIKN PVLINQHVKW PGGKKFEDKF
201: VETLKKYGYN GSYMSKQWLK QPAFIQSFAP TSLIYISNQT DLPKIFLIDD TNTPTQDTNQ SYWEITSDGY LDYIKEYVVG IGPWKDTIVP CSSNYMQTPS
301: DLVARAHARN LQVHPYTFRN ENQFVHFNFS EDPYNEFDYW INKMGVDGLF TDFTGSLHHY QEWTNPFASG EKEATRLLNK IELMLSKFKY T
001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA
Arabidopsis Description
GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.