Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11071 | Canola | extracellular, golgi | 61.22 | 30.69 |
| CDX68196 | Canola | golgi | 61.73 | 30.48 |
| CDX73068 | Canola | extracellular | 60.71 | 30.13 |
| CDX68195 | Canola | peroxisome | 61.22 | 29.13 |
| GSMUA_Achr6P34970_001 | Banana | extracellular, plasma membrane | 57.65 | 29.05 |
| KRH03139 | Soybean | extracellular, golgi | 56.63 | 28.61 |
| KRH56805 | Soybean | nucleus | 57.14 | 28.57 |
| Solyc06g069470.2.1 | Tomato | extracellular | 55.1 | 27.62 |
| PGSC0003DMT400010411 | Potato | extracellular, golgi | 55.1 | 27.62 |
| VIT_17s0000g07450.t01 | Wine grape | extracellular, golgi | 55.61 | 27.59 |
| CDX96524 | Canola | golgi, mitochondrion, peroxisome, plastid | 58.67 | 27.38 |
| TraesCS3D01G299100.1 | Wheat | extracellular, golgi | 54.59 | 27.37 |
| TraesCS3B01G333600.1 | Wheat | extracellular, golgi | 54.59 | 27.37 |
| TraesCS3A01G302700.1 | Wheat | extracellular, golgi | 54.08 | 27.11 |
| HORVU3Hr1G073870.1 | Barley | extracellular, golgi | 54.08 | 27.11 |
| Zm00001d012677_P012 | Maize | golgi | 53.57 | 26.85 |
| EES01511 | Sorghum | extracellular, golgi | 53.06 | 26.6 |
| CDX99041 | Canola | extracellular | 50.51 | 26.54 |
| CDX69980 | Canola | extracellular, golgi, vacuole | 50.0 | 26.34 |
| Os01t0763600-01 | Rice | extracellular | 52.04 | 26.09 |
| CDY72472 | Canola | mitochondrion | 18.37 | 9.57 |
| CDX82242 | Canola | cytosol | 16.84 | 7.45 |
| CDX85815 | Canola | mitochondrion | 10.2 | 6.92 |
| CDY11831 | Canola | extracellular, vacuole | 19.9 | 6.89 |
| CDY12599 | Canola | cytosol | 14.29 | 6.86 |
| CDY29432 | Canola | cytosol, peroxisome | 19.9 | 6.54 |
| CDX86766 | Canola | plasma membrane | 20.92 | 6.48 |
| CDY61647 | Canola | extracellular, plasma membrane | 24.49 | 6.36 |
| CDY58867 | Canola | plasma membrane | 22.45 | 6.09 |
| CDY45656 | Canola | extracellular, golgi, plasma membrane | 19.9 | 5.97 |
| CDY19634 | Canola | plasma membrane | 21.43 | 5.79 |
| CDY12605 | Canola | extracellular, vacuole | 20.41 | 5.59 |
| CDX89312 | Canola | extracellular, plasma membrane, vacuole | 21.43 | 5.55 |
| CDY02788 | Canola | plasma membrane | 20.92 | 5.5 |
| CDY13237 | Canola | extracellular, plasma membrane, vacuole | 20.92 | 5.4 |
| CDY17323 | Canola | plasma membrane | 20.92 | 5.34 |
| CDX92806 | Canola | extracellular, plasma membrane, vacuole | 19.39 | 5.31 |
| CDX88656 | Canola | plasma membrane | 20.92 | 5.29 |
| CDX94294 | Canola | extracellular, plasma membrane, vacuole | 20.41 | 5.28 |
| CDY32730 | Canola | plasma membrane | 19.9 | 5.23 |
| CDY36746 | Canola | plasma membrane | 20.41 | 5.22 |
| CDY46687 | Canola | extracellular, plasma membrane, vacuole | 18.88 | 5.16 |
| CDY02800 | Canola | extracellular, plasma membrane, plastid | 19.39 | 5.08 |
| CDY43885 | Canola | extracellular, golgi, plasma membrane | 19.39 | 5.06 |
| CDY32720 | Canola | extracellular, plastid, vacuole | 19.39 | 5.05 |
| CDY11996 | Canola | plasma membrane | 19.9 | 5.05 |
| CDY36036 | Canola | plasma membrane | 21.43 | 4.95 |
| CDY11832 | Canola | cytosol, peroxisome, plastid | 2.55 | 3.27 |
| CDY14478 | Canola | plasma membrane | 20.92 | 3.12 |
| CDY60415 | Canola | plasma membrane | 18.88 | 3.12 |
| CDY71959 | Canola | extracellular, plastid, vacuole | 4.08 | 2.44 |
| CDY42328 | Canola | cytosol | 2.04 | 1.55 |
| CDY12601 | Canola | extracellular | 1.02 | 1.47 |
| CDX86807 | Canola | cytosol | 1.53 | 1.3 |
| CDX86765 | Canola | extracellular, mitochondrion, vacuole | 1.02 | 1.2 |
| CDY60410 | Canola | extracellular | 0.51 | 0.74 |
| Os01t0763700-01 | Rice | plastid | 0.0 | 0.0 |
| CDX71386 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | GO:A0A078DBU0 | EnsemblPlants:CDX85814 | ProteinID:CDX85814 | ProteinID:CDX85814.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:GP_PDE_dom | EnsemblPlantsGene:GSBRNA2T00143583001 | InterPro:IPR017946 | InterPro:IPR030395 | PFAM:PF03009 |
| InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF5 | SUPFAM:SSF51695 | TMHMM:TMhelix |
| UniParc:UPI0004EE23B5 | : | : | : | : | : |
Description
BnaC06g23200D
Coordinates
chrLK031843:+:24362..26225
Molecular Weight (calculated)
22582.2 Da
IEP (calculated)
8.068
GRAVY (calculated)
-0.203
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLVLPFSLQ NQKEWLFFVF TECFPLIWLS LLTVCAGRTP YPLPGKRAKG DRLPIQTSRP YNIAHRGSNG EIPEETAAAY LRAIEEGTDF IETDILSSKD
101: GVLICFHDVI LDETANIASH KMFADRKRTY EVQGFNITGF FTFDFTLKEL KKLRTKQRYS LKHLPSKTHY DNGQITLFYT YGPPIFGFLQ FDPNIL
101: GVLICFHDVI LDETANIASH KMFADRKRTY EVQGFNITGF FTFDFTLKEL KKLRTKQRYS LKHLPSKTHY DNGQITLFYT YGPPIFGFLQ FDPNIL
001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA
Arabidopsis Description
GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.