CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19634	Canola	plasma membrane	92.62	76.03
CDX82242	Canola	cytosol	50.5	67.95
AT3G20520.1	Thale cress	plasma membrane	71.48	58.44
PGSC0003DMT400033423	Potato	extracellular	10.91	49.62
CDY36036	Canola	plasma membrane	68.96	48.41
CDY72472	Canola	mitochondrion	30.03	47.61
CDY45656	Canola	extracellular, golgi, plasma membrane	49.33	45.02
CDY12599	Canola	cytosol	30.2	44.12
KRH46281	Soybean	extracellular, golgi, plasma membrane	53.86	42.18
KRG98625	Soybean	extracellular	50.67	41.83
KRH46279	Soybean	extracellular	50.84	41.68
KRH14296	Soybean	endoplasmic reticulum	52.18	41.25
KRH73850	Soybean	endoplasmic reticulum	51.68	40.9
KRH46282	Soybean	extracellular, plasma membrane	52.18	40.87
Solyc12g014570.1.1	Tomato	nucleus	51.34	40.75
CDX86807	Canola	cytosol	15.6	40.43
CDY12605	Canola	extracellular, vacuole	48.49	40.36
VIT_19s0090g01490.t01	Wine grape	extracellular, plasma membrane, vacuole	51.01	40.16
PGSC0003DMT400033463	Potato	extracellular, plasma membrane	50.5	39.97
CDY42328	Canola	cytosol	17.28	39.92
KRG98622	Soybean	extracellular, golgi, plasma membrane	49.5	39.39
CDY61647	Canola	extracellular, plasma membrane	49.33	38.94
Solyc07g065120.2.1	Tomato	extracellular	49.16	38.91
CDY36746	Canola	plasma membrane	49.66	38.64
CDX94294	Canola	extracellular, plasma membrane, vacuole	48.99	38.57
CDX89312	Canola	extracellular, plasma membrane, vacuole	48.99	38.57
GSMUA_Achr8P25690_001	Banana	plasma membrane	48.99	38.42
CDX92806	Canola	extracellular, plasma membrane, vacuole	46.14	38.41
CDY17323	Canola	plasma membrane	49.33	38.28
PGSC0003DMT400057418	Potato	extracellular	48.32	38.25
PGSC0003DMT400033459	Potato	endoplasmic reticulum	16.61	38.22
GSMUA_Achr1P16520_001	Banana	extracellular, plasma membrane	48.15	38.22
CDY46687	Canola	extracellular, plasma membrane, vacuole	45.97	38.21
CDY13237	Canola	extracellular, plasma membrane, vacuole	48.49	38.08
KRH46280	Soybean	cytosol	16.78	38.02
TraesCS2D01G332500.1	Wheat	golgi	46.64	37.37
TraesCS2B01G352000.1	Wheat	extracellular, plasma membrane, vacuole	46.64	37.37
HORVU2Hr1G081920.3	Barley	plasma membrane	46.48	37.23
CDY11996	Canola	plasma membrane	48.15	37.13
TraesCS2A01G330200.1	Wheat	extracellular, plasma membrane, vacuole	46.31	37.1
TraesCS6D01G189300.1	Wheat	unclear	45.81	36.55
TraesCS6B01G226700.2	Wheat	golgi	45.81	36.55
TraesCS6A01G200600.1	Wheat	golgi	45.81	36.5
Zm00001d050917_P002	Maize	plasma membrane	45.97	36.39
GSMUA_Achr9P12610_001	Banana	endoplasmic reticulum, plasma membrane, plastid	47.99	36.39
EES10974	Sorghum	golgi	45.47	36.18
EES05342	Sorghum	plasma membrane	45.47	35.99
HORVU6Hr1G052420.10	Barley	extracellular, plasma membrane	45.47	35.42
CDY58867	Canola	plasma membrane	42.79	35.32
Zm00001d017036_P002	Maize	plasma membrane	45.3	34.97
KXG36695	Sorghum	plasma membrane	44.46	34.19
GSMUA_Achr3P03920_001	Banana	cytosol	44.8	33.8
TraesCS7A01G243900.3	Wheat	golgi	43.46	33.68
CDY32730	Canola	plasma membrane	41.78	33.42
CDY43885	Canola	extracellular, golgi, plasma membrane	42.11	33.42
Zm00001d022153_P006	Maize	extracellular, mitochondrion	43.46	33.33
CDY02788	Canola	plasma membrane	41.44	33.15
CDY32720	Canola	extracellular, plastid, vacuole	41.61	32.98
TraesCS7B01G147500.1	Wheat	unclear	42.62	32.9
CDY02800	Canola	extracellular, plasma membrane, plastid	41.11	32.75
CDX88656	Canola	plasma membrane	41.61	32.0
Zm00001d052875_P001	Maize	mitochondrion	41.44	31.83
TraesCS7D01G242500.1	Wheat	golgi, plastid, unclear	42.79	31.48
CDX86766	Canola	plasma membrane	33.39	31.44
CDY11831	Canola	extracellular, vacuole	29.36	30.92
OQU80956	Sorghum	cytosol	44.63	30.06
Zm00001d031412_P001	Maize	extracellular	36.74	29.4
CDY11832	Canola	cytosol, peroxisome, plastid	7.21	28.1
Os02t0187300-01	Rice	endoplasmic reticulum, extracellular	1.68	27.78
CDY71959	Canola	extracellular, plastid, vacuole	15.27	27.74
CDY11071	Canola	extracellular, golgi	15.6	23.79
CDX73068	Canola	extracellular	15.6	23.54
CDX96524	Canola	golgi, mitochondrion, peroxisome, plastid	16.11	22.86
CDX68196	Canola	golgi	15.1	22.67
CDX69980	Canola	extracellular, golgi, vacuole	13.59	21.77
CDX68195	Canola	peroxisome	14.77	21.36
CDX99041	Canola	extracellular	13.26	21.18
CDY14478	Canola	plasma membrane	46.64	21.16
CDY60415	Canola	plasma membrane	41.11	20.66
CDX85814	Canola	extracellular	6.54	19.9
CDX85815	Canola	mitochondrion	9.06	18.69
GSMUA_AchrUn_...	Banana	extracellular	1.85	6.71
CDX71386	Canola	extracellular	1.85	5.82
CDX86765	Canola	extracellular, mitochondrion, vacuole	1.17	4.22
Zm00001d025670_P001	Maize	mitochondrion	1.01	3.92
CDY12601	Canola	extracellular	0.34	1.47
CDY60410	Canola	extracellular	0.34	1.47

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078GWB5	UniProt:A0A078GWB5	EnsemblPlants:CDY29432	ProteinID:CDY29432
ProteinID:CDY29432.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00043041001	InterPro:IPR017946	InterPro:IPR030395
PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF8	SUPFAM:SSF51695
UniParc:UPI0004EF2C76	SEG:seg	:	:	:	:

Description

BnaC05g32380DBnaC05g32380D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078GWB5]

Coordinates

chrLK032237:+:3..2404

Molecular Weight (calculated)

66699.6 Da

IEP (calculated)

5.902

GRAVY (calculated)

-0.107

Length

596 amino acids

Sequence
(BLAST)

001: YILPVEEVAK LETSGLWLNI QHSDFYTQHN LSMRNFVLSL SSHMKINFIS SPDISFLKSV KKDFKPTKTK LIFRFLSQDQ IDPFTNQSYA SLAKNLTFIK
101: TFASGILVPK SYIWPLSSDL YLQPHTSLVT DAHGQGLQVF ASEFANDAVS AYNYSYDPTN EYLYFIDNGN FSVDGFLSDF PVTPYRAINC FSHLDKKNAK
201: KQANITIISK DGASGDFSGG TDLAYEKAIR DGVDFIDCNV QMSKDKIPFC MSSIDLMNST NVFYTSFRSL MSIAPEIQQG SRIFTFSLTM SEIQTLKPVI
301: SDPHRVYGLF RNPRNKNLGK FLTLSEFLLL PNRYSSLSGI LIKIEYAAYL ATHQGISIVD AVLDELKRAT SQVLIQSTDK AVLMEFKEKG KMTNEELVYA
401: VDEDIHDVTD SAIKDIKSFA GSIVISKKSV VPYSEGITRL EKETDVVPRL RSSGLRVYVE TFSNEFITQP YDFFSDPTVE IDYFVRADNE IDGIITDFPA
501: TTSRYIKNQC YSKMEQIRTG ELVSLANPEI LSPAEAPYPL LLDSNVTEPP LPEVRSQPPA PAPAPAKANV KSKAKAVQVS STVRAMVVLV SIFIVV

Best Arabidopsis Sequence Match ( AT3G20520.1 )
(BLAST)

001: MACPRVIFLI LITFFILQTA FSSSWQTLSG KPPAVIARGG FSGMFPDSSI QAYQLVNITT SPDVMLWCDL QLTKDGVGIC FPNLKLDNGS NVIRIDPHYK
101: ERFSVDFTWK ELSDVKLAQG VVSRPYIFDD VSSILAIEEV AKLTASGLWL NIQDSAFYAK HNLSMRNSVV SLSRRLKVNF ISSPGISFLK SMKNSVKPTV
201: TKLIFRFLKQ EHIEPFTNQS YGSLAKNLSY IRTFSSGILV PKSYIWPVDS ALYLQPHTSL VTDAHKEGLQ VFASEFANDF VIAYNYSYDP TAEYLSFIDN
301: GNFSVDGFLS DFPVTPYRAI NCFSHVDPKR AKEQAKITII SKNGASGDFP GCTDLAYQRA ASDGADILDC NVQMSKDKIP FCMSSFDLIN STNVIETSFR
401: NLSSVVSEIN PRRSGIYTFS LTMSQIQTLK PTISNLEKDS GLFRNPRNNK AGKFLTLSEF LFLPNRYSSL LGLLIEVENA AYLVEHQGIS VVDAVLDELK
501: RATTQQNKTS ARTILIQSTD KSVLMKFKEK NKMNHDELVY RVDDNIRDVA DSAIKDIKNF AGSIVISKKS VFPYKGFIIL EKETNIASKL KSNGLRVYVE
601: RFSNECVTHA FDFYDDPTLE IDSFVRDVQI DGIITDFPAT TARYRKNKCY GEFGLTTTGE LITFANPMLL PPAEAPYPAL LDSDVTEPPL PEARSQPPAS
701: SPSKAEEKAI EVPFAFIAMA ILVCFFISV

Arabidopsis Description

GDPDL5Glycerophosphodiester phosphodiesterase GDPDL5 [Source:UniProtKB/Swiss-Prot;Acc:F4JEQ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.