CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015928.1-P	Field mustard	extracellular, golgi, vacuole	90.71	96.95
CDX73068	Canola	extracellular	88.81	94.43
AT1G74210.1	Thale cress	extracellular	79.05	84.69
CDY11071	Canola	extracellular, golgi	76.19	81.84
CDX68196	Canola	golgi	76.19	80.6
CDX68195	Canola	peroxisome	76.19	77.67
CDX85815	Canola	mitochondrion	50.48	73.36
KRH03139	Soybean	extracellular, golgi	65.0	70.36
KRH56805	Soybean	nucleus	65.48	70.15
PGSC0003DMT400010411	Potato	extracellular, golgi	64.52	69.31
GSMUA_Achr6P34970_001	Banana	extracellular, plasma membrane	63.81	68.89
Solyc06g069470.2.1	Tomato	extracellular	64.05	68.8
CDX99041	Canola	extracellular	60.95	68.63
CDX69980	Canola	extracellular, golgi, vacuole	60.71	68.55
VIT_17s0000g07450.t01	Wine grape	extracellular, golgi	63.57	67.59
TraesCS3A01G302700.1	Wheat	extracellular, golgi	60.95	65.47
HORVU3Hr1G073870.1	Barley	extracellular, golgi	60.71	65.22
TraesCS3B01G333600.1	Wheat	extracellular, golgi	60.71	65.22
TraesCS3D01G299100.1	Wheat	extracellular, golgi	60.71	65.22
EES01511	Sorghum	extracellular, golgi	60.0	64.45
Os01t0763600-01	Rice	extracellular	59.76	64.19
Zm00001d012677_P012	Maize	golgi	59.76	64.19
CDX85814	Canola	extracellular	27.38	58.67
CDY12599	Canola	cytosol	19.29	19.85
CDX82242	Canola	cytosol	20.24	19.19
CDY42328	Canola	cytosol	10.48	17.05
CDY29432	Canola	cytosol, peroxisome	22.86	16.11
CDX86807	Canola	cytosol	8.33	15.22
CDY11832	Canola	cytosol, peroxisome, plastid	5.24	14.38
CDY45656	Canola	extracellular, golgi, plasma membrane	21.19	13.63
CDX86766	Canola	plasma membrane	19.76	13.11
CDY19634	Canola	plasma membrane	22.62	13.09
CDY12605	Canola	extracellular, vacuole	22.14	12.99
CDY72472	Canola	mitochondrion	11.43	12.77
CDY61647	Canola	extracellular, plasma membrane	22.62	12.58
CDY58867	Canola	plasma membrane	21.19	12.33
CDY32730	Canola	plasma membrane	21.43	12.08
CDX92806	Canola	extracellular, plasma membrane, vacuole	20.48	12.01
CDY46687	Canola	extracellular, plasma membrane, vacuole	20.48	11.99
CDY13237	Canola	extracellular, plasma membrane, vacuole	21.67	11.99
CDY02800	Canola	extracellular, plasma membrane, plastid	21.19	11.9
CDY17323	Canola	plasma membrane	21.67	11.85
CDY32720	Canola	extracellular, plastid, vacuole	21.19	11.84
CDY02788	Canola	plasma membrane	20.95	11.81
CDX89312	Canola	extracellular, plasma membrane, vacuole	20.95	11.62
CDX88656	Canola	plasma membrane	21.43	11.61
CDY43885	Canola	extracellular, golgi, plasma membrane	20.71	11.58
CDY11996	Canola	plasma membrane	21.19	11.51
CDX94294	Canola	extracellular, plasma membrane, vacuole	20.71	11.49
CDY36746	Canola	plasma membrane	20.95	11.49
CDY36036	Canola	plasma membrane	22.14	10.95
CDY11831	Canola	extracellular, vacuole	11.9	8.83
CDY60415	Canola	plasma membrane	21.19	7.5
CDY14478	Canola	plasma membrane	21.43	6.85
CDY71959	Canola	extracellular, plastid, vacuole	2.14	2.74
CDX86765	Canola	extracellular, mitochondrion, vacuole	0.48	1.2
CDX71386	Canola	extracellular	0.0	0.0
Os01t0763700-01	Rice	plastid	0.0	0.0
CDY60410	Canola	extracellular	0.0	0.0
CDY12601	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	GO:A0A078E769	EnsemblPlants:CDX96524	ProteinID:CDX96524	ProteinID:CDX96524.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:GP_PDE_dom	EnsemblPlantsGene:GSBRNA2T00102707001	InterPro:IPR017946	InterPro:IPR030395	PFAM:PF03009
InterPro:PLC-like_Pdiesterase_TIM-brl	PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF5	SUPFAM:SSF51695	TMHMM:TMhelix
UniParc:UPI0004EE98A8	:	:	:	:	:

Description

BnaA07g31350D

Coordinates

chrLK031894:+:1209168..1211770

Molecular Weight (calculated)

48205.6 Da

IEP (calculated)

9.334

GRAVY (calculated)

-0.364

Length

420 amino acids

Sequence
(BLAST)

001: MRDQRIVPKL FARGGTSSQI VYILWVTKTG IFVKCLIWLS LVTLCTGRTL YQRPGKGVKD AATKQPIQTS RPYNIAHRGS NGEIPEETKA AYLRAIEDGT
101: DFIETDILSS KDGVLICFHD VILDLTTDVA SRKEFAGRNR TYDVQGFKIP GFFTFDFTLK ELKTLRTKQR YAFRDQQYNG KYPIITFEEF LAIAQDAPRV
201: VGIYPEIKNP VLMNQHVKWP GGKRFEDKVV ETLKKHGYGG AYLSKQWLNK PLFIQSFAPS SLVYISNLTD SPKVLLIDDV IRPTQDTNQT YAEITSDAYF
301: TYIKEYVVGI GPWKDTIVPV TNNYMLTPTD LVKRAHAHKL QVHPYTYRNE NQFLHFNFSQ DPYKEYEYWI KEIGVDGLFT DFTGSLHNYQ EWASPLPETS
401: KSTRQLLSHI ASLVRPYAKA

Best Arabidopsis Sequence Match ( AT1G74210.1 )
(BLAST)

001: MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN
101: VASHKEFADR KRTYDVQGFN ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK NPVLMNQHVK WPGGKKFEDK
201: VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP
301: TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

Arabidopsis Description

GDPD5GDPD5 [Source:UniProtKB/TrEMBL;Acc:A0A178W3R5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.