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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 93.25 94.75
CDY13237 Canola extracellular, plasma membrane, vacuole 86.36 85.9
CDX86807 Canola cytosol 25.83 84.78
CDY72472 Canola mitochondrion 40.26 80.85
CDY12605 Canola extracellular, vacuole 75.23 79.33
CDY60410 Canola extracellular 14.04 77.94
CDX94294 Canola extracellular, plasma membrane, vacuole 76.82 76.62
CDY46687 Canola extracellular, plasma membrane, vacuole 72.72 76.57
AT4G26690.1 Thale cress extracellular, vacuole 76.69 76.28
CDX92806 Canola extracellular, plasma membrane, vacuole 72.19 76.12
CDX89312 Canola extracellular, plasma membrane, vacuole 76.29 76.09
CDY12601 Canola extracellular 13.64 75.74
CDY42328 Canola cytosol 25.17 73.64
CDY12599 Canola cytosol 38.68 71.57
CDY17323 Canola plasma membrane 68.21 67.06
CDY45656 Canola extracellular, golgi, plasma membrane 57.48 66.46
CDY36746 Canola plasma membrane 65.3 64.36
CDY11996 Canola plasma membrane 62.91 61.45
CDY71959 Canola extracellular, plastid, vacuole 26.23 60.37
PGSC0003DMT400033423 Potato extracellular 10.07 58.02
CDY58867 Canola plasma membrane 54.04 56.51
PGSC0003DMT400057418 Potato extracellular 55.23 55.38
Solyc07g065120.2.1 Tomato extracellular 54.97 55.11
KRH73850 Soybean endoplasmic reticulum 54.57 54.71
CDX86766 Canola plasma membrane 45.83 54.66
Solyc12g014570.1.1 Tomato nucleus 53.91 54.19
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 54.3 54.16
KRH14296 Soybean endoplasmic reticulum 54.04 54.11
PGSC0003DMT400033463 Potato extracellular, plasma membrane 53.38 53.52
KRG98625 Soybean extracellular 51.13 53.46
KRH46281 Soybean extracellular, golgi, plasma membrane 53.51 53.09
KRH46279 Soybean extracellular 50.86 52.82
KRH46282 Soybean extracellular, plasma membrane 52.19 51.77
KRH46280 Soybean cytosol 17.35 49.81
KRG98622 Soybean extracellular, golgi, plasma membrane 49.27 49.67
CDY29432 Canola cytosol, peroxisome 38.94 49.33
GSMUA_Achr8P25690_001 Banana plasma membrane 49.4 49.08
CDX82242 Canola cytosol 28.61 48.76
TraesCS6A01G200600.1 Wheat golgi 48.21 48.66
EES05342 Sorghum plasma membrane 48.48 48.61
TraesCS6B01G226700.2 Wheat golgi 47.95 48.46
TraesCS6D01G189300.1 Wheat unclear 47.95 48.46
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.56 48.26
CDY19634 Canola plasma membrane 46.23 48.07
Zm00001d050917_P002 Maize plasma membrane 47.81 47.94
TraesCS2D01G332500.1 Wheat golgi 47.15 47.85
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 47.15 47.85
HORVU2Hr1G081920.3 Barley plasma membrane 47.15 47.85
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 47.02 47.72
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 47.42 47.67
GSMUA_AchrUn_... Banana extracellular 10.33 47.56
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 49.27 47.33
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 47.95 47.32
EES10974 Sorghum golgi 46.89 47.26
CDY14478 Canola plasma membrane 80.4 46.19
Zm00001d017036_P002 Maize plasma membrane 47.15 46.11
CDY32720 Canola extracellular, plastid, vacuole 45.3 45.48
TraesCS7A01G243900.3 Wheat golgi 46.23 45.38
CDY02800 Canola extracellular, plasma membrane, plastid 44.9 45.32
CDY43885 Canola extracellular, golgi, plasma membrane 44.64 44.87
CDY11831 Canola extracellular, vacuole 33.51 44.7
CDY32730 Canola plasma membrane 43.97 44.56
TraesCS7B01G147500.1 Wheat unclear 45.56 44.56
Zm00001d025670_P001 Maize mitochondrion 9.01 44.44
CDY02788 Canola plasma membrane 43.84 44.43
KXG36695 Sorghum plasma membrane 45.56 44.39
Zm00001d052875_P001 Maize mitochondrion 45.17 43.94
CDX88656 Canola plasma membrane 45.03 43.87
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.5 43.24
Zm00001d031412_P001 Maize extracellular 42.52 43.09
GSMUA_Achr3P03920_001 Banana cytosol 44.77 42.78
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.7 42.59
CDY60415 Canola plasma membrane 66.89 42.58
CDY36036 Canola plasma membrane 47.55 42.28
CDX71386 Canola extracellular 10.2 40.74
OQU80956 Sorghum cytosol 46.76 39.89
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.85 38.89
CDX86765 Canola extracellular, mitochondrion, vacuole 8.48 38.55
CDY11832 Canola cytosol, peroxisome, plastid 7.68 37.91
CDX85814 Canola extracellular 6.36 24.49
CDY11071 Canola extracellular, golgi 12.45 24.04
CDX68196 Canola golgi 12.05 22.92
CDX73068 Canola extracellular 11.92 22.78
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 12.58 22.62
CDX68195 Canola peroxisome 12.19 22.33
CDX69980 Canola extracellular, golgi, vacuole 10.86 22.04
CDX99041 Canola extracellular 10.86 21.98
CDX85815 Canola mitochondrion 7.02 18.34
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078J5G4UniProt:A0A078J5G4EnsemblPlants:CDY61647ProteinID:CDY61647
ProteinID:CDY61647.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00034142001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
SignalP:SignalP-noTMUniParc:UPI0004EF1913SEG:seg:::
Description
BnaCnng38120DBnaCnng38120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5G4]
Coordinates
chrLK034021:-:5204..12812
Molecular Weight (calculated)
82632.7 Da
IEP (calculated)
5.117
GRAVY (calculated)
-0.089
Length
755 amino acids
Sequence
(BLAST)
001: MGASRVLLCC VVLIQLFAGQ TDAQRSSSRW QTLSGDAPLV IARGGFSGLF PDSSSIAYGF AKQTSVAGAA LWCDVQLTKD GAGICFPDLK LNNASTVEDV
101: YPNRQKTYSV NGVSTQGWFT IDFSLRDLSD VKLNRGILSR SEKFNGIYPI LTVEDVTTQI KPESFWLNVQ YDAFYAQQNL SMSSFLISAS RTVSIDYISS
201: PEVNFFKKIA GRFGRNGPSF VFQFLGKEDF EPTTNRTYDS ILSNLTFVKT FASGILVPKS YILPLDDNQY LVLPPKSLVL DAHKAGLQVY VSGFVNDNDI
301: AHDYSSDPVS EYLSFVDNGN FSVDGVLSDF PITASASIDC FSHLGRNATK QVDFLVISKN GASGEYPGCT DMAYDKAIKD GADVIDCSVQ MSSDGKPFCS
401: SSIDLSNITN IAQTSFAQRS THVPEISSND GIYTFSLTWS EIQTLKPAIS NPYRAYNMFR NPNEKNSGKF ILLSEFLSLA KNSTSLSGVL ISVEKAVYLR
501: EKQGLDVVKA VLDTLTETGY SNGSTTKTKV MIQSTNSSVL VDFKKQSSKY ETVYKVEEKI GDISDSAIED IKKFANAVVI VKTSVFPLFD DGFIIRQTNV
601: VEKLHKSKLP VYVELFQNEF VSQPFDFFSD PTVEINSYVS GAGIDGTITE FPFTAARYKR NRCLGTKETI PPQYMSPVPP GLFLNLVNAI PPAQAPNPVF
701: TDDDVTEPPL PPVTAKSPTS APGTSFTNAQ APRSSGQTRL TLSLRLSVFA SLLLL
Best Arabidopsis Sequence Match ( AT4G26690.1 )
(BLAST)
001: MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS
101: SSIEAVYPTR QKSYPVNGVP TSGWFTIDFS LKDLKDVNLI RGILSRSEKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA FYAQHNLSMS SFLVAASKTV
201: LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF
301: ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD
401: GTPFCLSSID LGNSTTVSLT AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS DFLSLAKNST SLSGVLISVE
501: NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT
601: NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP
701: VFTDADVTEP PLPPVTAKAP TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL
Arabidopsis Description
GDPDL3Glycerophosphodiester phosphodiesterase GDPDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ11]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.