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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:extracellular
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36746 Canola plasma membrane 91.2 92.04
CDY71959 Canola extracellular, plastid, vacuole 33.64 79.27
CDY17323 Canola plasma membrane 77.75 78.26
AT5G55480.1 Thale cress plasma membrane 75.03 75.72
CDY45656 Canola extracellular, golgi, plasma membrane 63.65 75.34
CDY58867 Canola plasma membrane 65.46 70.08
CDY46687 Canola extracellular, plasma membrane, vacuole 61.58 66.39
CDX94294 Canola extracellular, plasma membrane, vacuole 64.94 66.31
CDX89312 Canola extracellular, plasma membrane, vacuole 64.81 66.18
CDX92806 Canola extracellular, plasma membrane, vacuole 61.19 66.06
CDY12599 Canola cytosol 34.02 64.46
CDX86766 Canola plasma membrane 52.78 64.45
CDY61647 Canola extracellular, plasma membrane 61.45 62.91
CDY12605 Canola extracellular, vacuole 58.21 62.85
CDY72472 Canola mitochondrion 30.53 62.77
CDY13237 Canola extracellular, plasma membrane, vacuole 60.67 61.79
CDY42328 Canola cytosol 19.53 58.53
CDX86765 Canola extracellular, mitochondrion, vacuole 12.55 58.43
CDY60410 Canola extracellular 10.22 58.09
CDY12601 Canola extracellular 10.09 57.35
CDX86807 Canola cytosol 16.69 56.09
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 52.52 53.63
PGSC0003DMT400033423 Potato extracellular 9.06 53.44
KRH73850 Soybean endoplasmic reticulum 51.62 52.99
KRH46280 Soybean cytosol 17.98 52.85
KRH46281 Soybean extracellular, golgi, plasma membrane 51.36 52.17
PGSC0003DMT400057418 Potato extracellular 50.71 52.06
Solyc07g065120.2.1 Tomato extracellular 50.58 51.93
KRH14296 Soybean endoplasmic reticulum 50.45 51.72
Solyc12g014570.1.1 Tomato nucleus 50.06 51.53
PGSC0003DMT400033463 Potato extracellular, plasma membrane 49.68 51.0
KRG98625 Soybean extracellular 47.48 50.83
KRH46279 Soybean extracellular 47.22 50.21
KRH46282 Soybean extracellular, plasma membrane 49.29 50.07
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 47.35 49.19
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 47.35 49.19
TraesCS2D01G332500.1 Wheat golgi 47.35 49.19
KRG98622 Soybean extracellular, golgi, plasma membrane 47.22 48.73
TraesCS6A01G200600.1 Wheat golgi 47.09 48.66
HORVU2Hr1G081920.3 Barley plasma membrane 46.83 48.66
TraesCS6D01G189300.1 Wheat unclear 46.96 48.59
TraesCS6B01G226700.2 Wheat golgi 46.83 48.46
GSMUA_Achr8P25690_001 Banana plasma membrane 47.61 48.42
Zm00001d050917_P002 Maize plasma membrane 46.96 48.21
EES05342 Sorghum plasma membrane 46.96 48.21
CDY29432 Canola cytosol, peroxisome 37.13 48.15
CDY19634 Canola plasma membrane 45.15 48.07
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 47.09 47.58
EES10974 Sorghum golgi 46.05 47.53
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 47.74 46.95
Zm00001d017036_P002 Maize plasma membrane 46.44 46.5
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 45.02 46.34
CDX82242 Canola cytosol 25.61 44.7
TraesCS7A01G243900.3 Wheat golgi 44.37 44.6
KXG36695 Sorghum plasma membrane 43.98 43.87
Zm00001d025670_P001 Maize mitochondrion 8.67 43.79
TraesCS7B01G147500.1 Wheat unclear 43.21 43.26
Zm00001d022153_P006 Maize extracellular, mitochondrion 43.08 42.86
Zm00001d052875_P001 Maize mitochondrion 42.82 42.65
Zm00001d031412_P001 Maize extracellular 40.75 42.28
GSMUA_Achr3P03920_001 Banana cytosol 42.82 41.9
CDY36036 Canola plasma membrane 45.92 41.81
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 43.47 41.48
GSMUA_AchrUn_... Banana extracellular 8.8 41.46
CDY43885 Canola extracellular, golgi, plasma membrane 39.84 41.01
CDY02788 Canola plasma membrane 39.46 40.94
CDY32720 Canola extracellular, plastid, vacuole 39.72 40.82
CDY11831 Canola extracellular, vacuole 29.88 40.81
CDY32730 Canola plasma membrane 39.33 40.81
CDX88656 Canola plasma membrane 40.49 40.39
CDY02800 Canola extracellular, plasma membrane, plastid 38.94 40.24
PGSC0003DMT400033459 Potato endoplasmic reticulum 13.45 40.15
OQU80956 Sorghum cytosol 44.37 38.76
CDY60415 Canola plasma membrane 55.11 35.92
CDY14478 Canola plasma membrane 60.67 35.69
CDX71386 Canola extracellular 8.15 33.33
CDY11832 Canola cytosol, peroxisome, plastid 6.47 32.68
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.42 30.56
CDY11071 Canola extracellular, golgi 11.38 22.51
CDX68196 Canola golgi 11.38 22.17
CDX73068 Canola extracellular 11.0 21.52
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 11.51 21.19
CDX69980 Canola extracellular, golgi, vacuole 10.09 20.97
CDX99041 Canola extracellular 9.96 20.64
CDX68195 Canola peroxisome 11.0 20.63
CDX85814 Canola extracellular 5.05 19.9
CDX85815 Canola mitochondrion 6.6 17.65
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078FFF1UniProt:A0A078FFF1EnsemblPlants:CDY11996ProteinID:CDY11996
ProteinID:CDY11996.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00060849001InterPro:IPR017946
InterPro:IPR030395PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1
SUPFAM:SSF51695TMHMM:TMhelixUniParc:UPI0004EE302CSEG:seg::
Description
BnaC03g14220DBnaC03g14220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFF1]
Coordinates
chrLK032015:-:783549..787738
Molecular Weight (calculated)
85647.4 Da
IEP (calculated)
5.037
GRAVY (calculated)
-0.047
Length
773 amino acids
Sequence
(BLAST)
001: MITSYMQDNP SMFGFRASKF ILSVLVLIQL LPTQLLAQRS KSPWQTLTGE APLIIARGGF SGMFPDSSFN AYSFVASTSA PDAVLWCDVQ LTKDGVGICF
101: PYVTMYNDSN VRDAYPKNKN SYLLNGVLTQ DWFTVDFTSK DLNTVFLTRG VLSRSNAFDN NQNVISTVQD VATEFKPAGF WLNVQHDAFY TQHNLSMSSF
201: LLSVSKTVII DYLSSPEVSF FRNIGARFGK TGPKFVFRFL DKDDVEVSTN QTYGALMRNL TFIKTFASGV LVPKSYIWPV KDQYLLPHTS FVRDAHKAGL
301: EVYASGFAND FDIAYNYSYD PLTEYLSFMD NGDFSVDGFL SDFPLTASSA VDCFSHLGSN ASTQVDFLVI SKNGANGDYP GSTDLAYTKA IKDGADIIDC
401: AVQMSSDGIP FCLNSTNLGE SMNIFQTPFR NRSTTVPEFN SLAGLYSFNL AWSEIQTLTP AISNPYSRNF HMFRNPRERS SGKLVSLSEF LNLANNSSSL
501: VGVLINVEHA AYLREKQGLD VVKAVLDTLK ESGYSNATKR VMIQSSNSSV LVDIRKQSRY ETVYQVEETI RDIQDSAIQD IKKFADAVVV GRYSLYPVSA
601: SFITGQTNLV ERLQKFKLPV YVETFRNEFV SQAYDFFSDA TVEINTHVTG AGVSGTITEF PLTAARYKRN RCVARKDTPV YMIPVRPAGL LEIVSPTFLP
701: PAEAPNPVFT DADITEPPLP PVTAKAPTTS PGPLSTEIEI VLMVVKVAVF VIFGCDLEPH SNEPYLATSL QDF
Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.