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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72472 Canola mitochondrion 23.06 80.59
CDY61647 Canola extracellular, plasma membrane 46.19 80.4
CDY13237 Canola extracellular, plasma membrane, vacuole 45.74 79.18
CDY60410 Canola extracellular 7.76 75.0
CDY12605 Canola extracellular, vacuole 40.26 73.88
AT4G26690.1 Thale cress extracellular, vacuole 42.39 73.39
CDX94294 Canola extracellular, plasma membrane, vacuole 41.63 72.26
CDY12601 Canola extracellular 7.46 72.06
CDX89312 Canola extracellular, plasma membrane, vacuole 41.4 71.86
CDY46687 Canola extracellular, plasma membrane, vacuole 39.04 71.55
CDX92806 Canola extracellular, plasma membrane, vacuole 38.74 71.09
CDY12599 Canola cytosol 21.99 70.83
CDX86807 Canola cytosol 11.95 68.26
CDY60415 Canola plasma membrane 59.74 66.19
CDY42328 Canola cytosol 12.86 65.5
CDY17323 Canola plasma membrane 38.28 65.49
CDY71959 Canola extracellular, plastid, vacuole 15.98 64.02
CDY45656 Canola extracellular, golgi, plasma membrane 31.43 63.25
CDY36746 Canola plasma membrane 36.45 62.53
CDY11996 Canola plasma membrane 35.69 60.67
PGSC0003DMT400033423 Potato extracellular 6.01 60.31
CDY58867 Canola plasma membrane 30.59 55.68
Solyc12g014570.1.1 Tomato nucleus 30.52 53.4
KRH73850 Soybean endoplasmic reticulum 30.21 52.72
PGSC0003DMT400033463 Potato extracellular, plasma membrane 29.98 52.32
KRH14296 Soybean endoplasmic reticulum 29.91 52.12
Solyc07g065120.2.1 Tomato extracellular 29.83 52.06
PGSC0003DMT400057418 Potato extracellular 29.76 51.93
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 29.91 51.92
KRG98625 Soybean extracellular 28.39 51.66
CDX86766 Canola plasma membrane 24.89 51.66
KRH46281 Soybean extracellular, golgi, plasma membrane 29.6 51.12
KRH46282 Soybean extracellular, plasma membrane 29.3 50.59
KRH46280 Soybean cytosol 10.12 50.57
KRH46279 Soybean extracellular 27.55 49.79
GSMUA_Achr8P25690_001 Banana plasma membrane 27.78 48.03
KRG98622 Soybean extracellular, golgi, plasma membrane 27.25 47.8
TraesCS6A01G200600.1 Wheat golgi 27.09 47.59
TraesCS6D01G189300.1 Wheat unclear 27.02 47.52
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 28.31 47.33
TraesCS6B01G226700.2 Wheat golgi 26.79 47.12
TraesCS2D01G332500.1 Wheat golgi 26.48 46.77
CDY29432 Canola cytosol, peroxisome 21.16 46.64
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 26.41 46.64
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 26.33 46.51
EES05342 Sorghum plasma membrane 26.64 46.48
EES10974 Sorghum golgi 26.48 46.46
HORVU2Hr1G081920.3 Barley plasma membrane 26.26 46.37
CDY19634 Canola plasma membrane 25.57 46.28
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 26.94 46.27
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 26.41 46.21
Zm00001d050917_P002 Maize plasma membrane 26.41 46.08
CDX82242 Canola cytosol 15.37 45.6
PGSC0003DMT400033459 Potato endoplasmic reticulum 8.98 45.56
GSMUA_AchrUn_... Banana extracellular 5.63 45.12
Zm00001d025670_P001 Maize mitochondrion 5.25 45.1
TraesCS7A01G243900.3 Wheat golgi 26.26 44.86
KXG36695 Sorghum plasma membrane 26.18 44.39
Zm00001d017036_P002 Maize plasma membrane 26.03 44.3
CDY11831 Canola extracellular, vacuole 18.87 43.82
TraesCS7B01G147500.1 Wheat unclear 25.72 43.78
CDX86765 Canola extracellular, mitochondrion, vacuole 5.48 43.37
Zm00001d022153_P006 Maize extracellular, mitochondrion 25.49 43.11
CDY32720 Canola extracellular, plastid, vacuole 24.66 43.09
CDY43885 Canola extracellular, golgi, plasma membrane 24.58 43.01
Zm00001d031412_P001 Maize extracellular 24.35 42.95
Zm00001d052875_P001 Maize mitochondrion 25.34 42.91
CDY32730 Canola plasma membrane 24.2 42.68
CDY02800 Canola extracellular, plasma membrane, plastid 24.28 42.65
CDY02788 Canola plasma membrane 24.12 42.55
GSMUA_Achr3P03920_001 Banana cytosol 25.57 42.53
CDX88656 Canola plasma membrane 25.04 42.45
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 25.95 42.1
CDY36036 Canola plasma membrane 25.72 39.81
CDX71386 Canola extracellular 5.63 39.15
OQU80956 Sorghum cytosol 26.33 39.1
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 0.99 36.11
CDY11832 Canola cytosol, peroxisome, plastid 3.81 32.68
CDY11071 Canola extracellular, golgi 6.93 23.27
CDX68196 Canola golgi 6.7 22.17
CDX73068 Canola extracellular 6.54 21.77
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 6.85 21.43
CDX69980 Canola extracellular, golgi, vacuole 6.01 21.24
CDX99041 Canola extracellular 6.01 21.18
CDX68195 Canola peroxisome 6.62 21.12
CDX85814 Canola extracellular 3.12 20.92
CDX85815 Canola mitochondrion 4.26 19.38
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
Gene3D:3.20.20.190Gene3D:3.30.200.20MapMan:50.2.7GO:A0A078FQ55UniProt:A0A078FQ55EnsemblPlants:CDY14478
ProteinID:CDY14478ProteinID:CDY14478.1InterPro:EGF-like_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0016787GO:GO:0019538InterPro:GP_PDE_dom
EnsemblPlantsGene:GSBRNA2T00079162001InterPro:IPR000719InterPro:IPR017946InterPro:IPR030395InterPro:Kinase-like_dom_sfPFAM:PF03009
PFAM:PF07714PFAM:PF14380InterPro:PLC-like_Pdiesterase_TIM-brlScanProsite:PS00022ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF51695SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI0004EEFEBFInterPro:WAK_assoc_CSEG:seg:::
Description
BnaC03g21170DBnaC03g21170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ55]
Coordinates
chrLK032043:-:592302..597919
Molecular Weight (calculated)
145714.0 Da
IEP (calculated)
5.849
GRAVY (calculated)
-0.149
Length
1314 amino acids
Sequence
(BLAST)
0001: MDPGRLPMLL WQRAGTDLLG LRMEETPTNF KGGNPTRGGL RAWMFLLCGV VLIQLFAGQT DAQRSRGPWQ TLSGDAPLVI ARGGFSGLFP DSSLKAYSFV
0101: KQTSVAGAAL WCDVQLTKDG AGICFPDLKL NNASTIDFVY PNRKKSYLVN GVPTQGWFTI EFSLRELSNV TLNRGILFRS EKFDGIYPIS TVGDVTTQIK
0201: PESFWLNVQH DAFYAQQNLS MSSFLISASR NVSIDYVSSP EVNFFKKIAG DFGPNGPSFV FQFLGKEEFE PTTNRTYGSI LSNLTFVKTF ASGILVPKSY
0301: ILPLDDKQYL LPPTSLVQDA HKAGLQVYVS GFANDIDIAH DYSFDPVTEY LSFVDNGNFS VDGVLSDFPI TASSSIECFS HLGKNATKQV DFLVISKNGA
0401: SGDYPGCTDM AYDKAIKDGA DVIDCSVQMS SDGIPFCSRS IDLSNSTVIS HTPYAQRSIN VPEISSNGGI YTFSLTWAEI QSLTPAISNP YRLYSMFRNP
0501: DETNSGKLIL LSEFLNLAKN STSLSGVLIS VENAVYLREK QGLDVVKAVL DTLMETGYSN GITTEKVMIQ STESSVLVDF KEQSKYDTVY KIEKNISDIS
0601: DAAIQAIKKF ANAVVIRKET VFSLFDSFIT TQTNVVKKLQ KSWLPVYVEL FQNEFVSQPY DFFADPTVEI NSYITGAGIS GTIIEFPFTA ARYKRNRCLG
0701: TKEPLPPYMS PVLPGGLLPF LNAKPPAQAP NPVFTEEDVS AYDLYKRCSQ PFPNFNLNCS GGFAEITVSS VKFRILKANY TSRIIKLARS DYIDTLCPSD
0801: PLNEPFYQSD LQLVNDTDMI TMLYDCQDLS ALIYSSEAYN YVTDFQCNDQ KEGLNNYCVV INSSSSLFNG RVGSKLHTLD SDNLKKTLEQ GFEVELKQDC
0901: SMCLDSKGAS CGYNQTSGKF VCYCDDGTHG PNCSSGKRSH ESLVNAVRKV SGSIAGVVMF FVLLSLFLLF LRKRQVRQRQ QNMKSLIPLK HYTYAQVKRI
1001: TKSFAEVVGR GGFGIVYRGT LSDGRMVAVK VLKDSKGNGE DFTNEVASMS QTSHLNIVTL LGFCSEGSKR AIIYEFLGNG SLDKFISGNT SMNLDWTSLY
1101: QIALGVARGL EYLHHGCKTR IVHFDIKPQN VLLDENFCPK VSDFGLAKLC EKKESALSLL DTRGTVGYIA PEMISRVYGS VSHKSDVYSY GMLVLEMIGA
1201: RNKERAHQDS TSNTSSIYFP EWVYRDIELG KSRRLIENEI SNEEHELAKK MTLVGLWCIQ SSPSERPPMN RVVEMMEGSL DALEVPPRPV LQIPIAPLQE
1301: SSTLSRDMSV YTEE
Best Arabidopsis Sequence Match ( AT1G66970.1 )
(BLAST)
001: MNSRPSNPTK LVIRSSTLLF CGVVLIHLFA AQIDAQRSTS RWQTLNGDAP LVIARGGFSG LYPDSSIAAY QLATLTSVAD VVLWCDLQLT KDGLGICFPD
101: LNLANASTID RVYPNREKSY SVNGVTTKGW FPNDFSLTEL QNFLLIRGIL SRTDRFDGNG YLISTIEDVV TTLNREGFWL NVQHDAFYEQ QNLSMSSFLL
201: SVSRTVSIDF ISSPEVNFFK KITGSFGRNG PTFVFQFLGK EDFEPTTNRT YGSILSNLTF VKTFASGILV PKSYILPLDD EQYLVPHTSL VQDAHKAGLQ
301: VYVSGFANDV DIAYNYSSDP VSEYLSFVDN GDFSVDGVLS DFPITASAAV DCFSHIGRNA TKQVDFLVIS KDGASGDYPG CTDLAYEKAI KDGADVIDCS
401: VQMSSDGVPF CLRSIDLRNS IAALQNTFSN RSTSVPEISS VPGIFTFSLT WPEIQSLTPA ISNPFRVYRI FRNPREKNSG KLISLSQFLD LAKTYTSLSG
501: VLISVENAAY LREKQGLDVV QAVLDTLTEA GYSNGTTTTK VMIQSTNSSV LVDFKKQSKY ETVYKIEETI GNIRDSAIED IKKFANAVVI NKDSVFPNSD
601: SFLTGQTNVV ERLQKSQLPV YVELFRNEFV SQAYDFFSDA TVEINAYIYG AGINGTITEF PFTAARYKRN RCLGREEVPP YMLPVNPGGL LNVMSPLSLP
701: PAQAPNQDFI EADVTEPPLS PVIAKAPTST PGTPSTIAQA PSGQTRLKLS LLLSVFFLSL LLL
Arabidopsis Description
SVL2SHV3-like 2 [Source:UniProtKB/TrEMBL;Acc:F4HQ30]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.