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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 2
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002904.1-P Field mustard extracellular, plasma membrane, vacuole 97.92 99.21
CDY71959 Canola extracellular, plastid, vacuole 41.93 98.17
CDY45656 Canola extracellular, golgi, plasma membrane 80.6 94.79
AT5G55480.1 Thale cress plasma membrane 83.85 84.07
CDY36746 Canola plasma membrane 81.12 81.33
CDY11996 Canola plasma membrane 78.26 77.75
CDX94294 Canola extracellular, plasma membrane, vacuole 71.22 72.26
CDY46687 Canola extracellular, plasma membrane, vacuole 67.45 72.25
CDX89312 Canola extracellular, plasma membrane, vacuole 70.96 71.99
CDX92806 Canola extracellular, plasma membrane, vacuole 66.8 71.65
CDY58867 Canola plasma membrane 66.41 70.64
CDY12605 Canola extracellular, vacuole 64.06 68.72
CDY60410 Canola extracellular 12.11 68.38
CDY61647 Canola extracellular, plasma membrane 67.06 68.21
CDY42328 Canola cytosol 22.79 67.83
CDY13237 Canola extracellular, plasma membrane, vacuole 66.54 67.33
CDY12599 Canola cytosol 35.68 67.16
CDX86766 Canola plasma membrane 55.21 66.98
CDX86807 Canola cytosol 19.92 66.52
CDY72472 Canola mitochondrion 32.16 65.69
CDY12601 Canola extracellular 11.33 63.97
KRH73850 Soybean endoplasmic reticulum 55.73 56.84
Solyc12g014570.1.1 Tomato nucleus 55.47 56.72
KRH14296 Soybean endoplasmic reticulum 55.47 56.5
PGSC0003DMT400033423 Potato extracellular 9.64 56.49
PGSC0003DMT400057418 Potato extracellular 55.21 56.31
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 55.47 56.27
Solyc07g065120.2.1 Tomato extracellular 55.08 56.18
KRH46281 Soybean extracellular, golgi, plasma membrane 55.6 56.11
PGSC0003DMT400033463 Potato extracellular, plasma membrane 54.69 55.78
CDX86765 Canola extracellular, mitochondrion, vacuole 11.98 55.42
KRH46282 Soybean extracellular, plasma membrane 54.17 54.66
KRG98625 Soybean extracellular 51.3 54.57
KRH46279 Soybean extracellular 51.04 53.92
KRG98622 Soybean extracellular, golgi, plasma membrane 50.91 52.2
KRH46280 Soybean cytosol 17.84 52.09
GSMUA_Achr8P25690_001 Banana plasma membrane 50.39 50.92
TraesCS6A01G200600.1 Wheat golgi 49.09 50.4
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 51.56 50.38
TraesCS6D01G189300.1 Wheat unclear 48.83 50.2
TraesCS6B01G226700.2 Wheat golgi 48.7 50.07
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 48.31 49.87
TraesCS2D01G332500.1 Wheat golgi 48.18 49.73
EES05342 Sorghum plasma membrane 48.7 49.67
HORVU2Hr1G081920.3 Barley plasma membrane 48.05 49.6
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 47.92 49.46
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 49.22 49.41
Zm00001d050917_P002 Maize plasma membrane 48.44 49.4
EES10974 Sorghum golgi 48.18 49.4
CDY29432 Canola cytosol, peroxisome 38.28 49.33
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 48.05 49.13
CDX82242 Canola cytosol 27.86 48.31
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.28 48.26
Zm00001d017036_P002 Maize plasma membrane 48.31 48.06
CDY19634 Canola plasma membrane 45.31 47.93
TraesCS7A01G243900.3 Wheat golgi 46.61 46.55
TraesCS7B01G147500.1 Wheat unclear 45.57 45.34
Zm00001d025670_P001 Maize mitochondrion 8.98 45.1
KXG36695 Sorghum plasma membrane 44.79 44.39
CDY43885 Canola extracellular, golgi, plasma membrane 42.97 43.94
GSMUA_Achr3P03920_001 Banana cytosol 45.18 43.92
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.27 43.76
CDY32720 Canola extracellular, plastid, vacuole 42.84 43.75
Zm00001d052875_P001 Maize mitochondrion 44.14 43.69
CDY32730 Canola plasma membrane 42.19 43.49
CDY02788 Canola plasma membrane 42.19 43.49
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.7 43.33
CDY02800 Canola extracellular, plasma membrane, plastid 42.06 43.18
CDX88656 Canola plasma membrane 43.36 42.97
CDY11831 Canola extracellular, vacuole 31.64 42.93
CDY36036 Canola plasma membrane 47.27 42.76
GSMUA_AchrUn_... Banana extracellular 9.11 42.68
Zm00001d031412_P001 Maize extracellular 41.15 42.42
OQU80956 Sorghum cytosol 45.44 39.44
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.82 38.89
CDY60415 Canola plasma membrane 59.51 38.53
CDY14478 Canola plasma membrane 65.49 38.28
CDY11832 Canola cytosol, peroxisome, plastid 7.29 36.6
CDX71386 Canola extracellular 8.59 34.92
CDY11071 Canola extracellular, golgi 11.85 23.27
CDX68196 Canola golgi 11.72 22.67
CDX73068 Canola extracellular 11.46 22.28
CDX96524 Canola golgi, mitochondrion, peroxisome, plastid 11.85 21.67
CDX69980 Canola extracellular, golgi, vacuole 10.29 21.24
CDX99041 Canola extracellular 10.29 21.18
CDX68195 Canola peroxisome 11.33 21.12
CDX85814 Canola extracellular 5.34 20.92
CDX85815 Canola mitochondrion 6.51 17.3
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1GO:A0A078FY92UniProt:A0A078FY92EnsemblPlants:CDY17323ProteinID:CDY17323
ProteinID:CDY17323.1GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:GP_PDE_domEnsemblPlantsGene:GSBRNA2T00095418001InterPro:IPR017946InterPro:IPR030395
PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brlPFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695
SignalP:SignalP-noTMUniParc:UPI0004EF4193SEG:seg:::
Description
BnaA10g09570DBnaA10g09570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FY92]
Coordinates
chrLK032072:-:279204..283596
Molecular Weight (calculated)
84263.4 Da
IEP (calculated)
5.610
GRAVY (calculated)
-0.037
Length
768 amino acids
Sequence
(BLAST)
001: MTTYMRDKPS MFGSRASKFL LSALILIQLL PTQLLAQRSK SPWQTLTGSA PLIIARGGFS GLLPDSSVDA YSIVSQTSVS GAVLWCDVQL TKDGVGICFP
101: DVKMMNASSI QDAYPKRKNS YLVNGVPTQD WFTIDFTLKD LKSVFLIRGI LSRSDAFDNN QYAISTVQDI AMELKPKSFW LNVQHDAFYA QHNLSISKFL
201: LSLPKTVTIN YLSSPEVTFL RSIGGRFGKA GPKFVFRFLE KDDVEVSTNQ TYGTLLGNLT FIKTFASGVL VPKSYIWPLE DQYLSPHTSF VQDAHKAGLE
301: VYASGFANDF DMAYNYSFDP LAEYLSFMDN GDFSVDGFLS DFPLTASSAV DCFSHLGSNA STQVDFLVIS KNGASGDYPG CTDLAYSKAI KDGADIIDCS
401: VQMSLDGIPF CLNSVDLGES TNIVQSPFRN RSSTVPEIAP LGGLYSFSLT WSEIQTLRPA ITNPYNRDFN LFRNPKERSS GKLVSLSDFL NLAKNSTSLA
501: GVLISVENAA YLREKQGLDV VKAVLDTLTK AGYSNATTTT KKVMIQSTNS SVLVDFKKQS RYETVYQVEE TIRDILDSAI QDIKKFADAV VVRKNSVFPV
601: SESFTTGQTN LVERLQRFQL PVYVELFRNE FVSQPWDFLS DATVEINSHV TGAGINGTIT EFPLTAARYK RNKCLTRKDL PPYMSPVQPA GLLSIMSPTS
701: LPPAEAPNPV FTDADVTEPP LPPVIAKAPT SSPGPLSTDE KSPNGQTRVT LSLLLSAFAM VLASLLLL
Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.