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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17323 Canola plasma membrane 99.21 97.92
CDY45656 Canola extracellular, golgi, plasma membrane 81.4 94.49
AT5G55480.1 Thale cress plasma membrane 83.91 83.03
Bra028979.1-P Field mustard plasma membrane 80.74 79.9
Bra019092.1-P Field mustard extracellular, plasma membrane, vacuole 68.21 72.11
Bra026409.1-P Field mustard extracellular, plasma membrane, vacuole 71.9 71.99
Bra035208.1-P Field mustard extracellular, golgi, plastid 24.8 68.86
Bra004101.1-P Field mustard extracellular, plasma membrane, vacuole 67.28 68.64
Bra035244.1-P Field mustard plasma membrane 67.94 67.94
Bra034037.1-P Field mustard extracellular, vacuole 64.12 67.88
Bra019073.1-P Field mustard extracellular, plasma membrane, plastid 44.06 66.8
Bra034040.1-P Field mustard extracellular 11.08 61.76
Bra035209.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 73.35 57.68
KRH73850 Soybean endoplasmic reticulum 56.33 56.71
PGSC0003DMT400033423 Potato extracellular 9.76 56.49
KRH14296 Soybean endoplasmic reticulum 56.07 56.37
Solyc12g014570.1.1 Tomato nucleus 55.8 56.32
PGSC0003DMT400057418 Potato extracellular 55.94 56.31
Solyc07g065120.2.1 Tomato extracellular 55.8 56.18
VIT_19s0090g01490.t01 Wine grape extracellular, plasma membrane, vacuole 56.07 56.14
KRH46281 Soybean extracellular, golgi, plasma membrane 56.33 56.11
PGSC0003DMT400033463 Potato extracellular, plasma membrane 55.01 55.38
KRH46282 Soybean extracellular, plasma membrane 55.01 54.8
KRG98625 Soybean extracellular 51.85 54.43
KRH46279 Soybean extracellular 51.72 53.92
KRG98622 Soybean extracellular, golgi, plasma membrane 51.58 52.2
KRH46280 Soybean cytosol 18.07 52.09
GSMUA_Achr8P25690_001 Banana plasma membrane 51.06 50.92
TraesCS6A01G200600.1 Wheat golgi 49.87 50.53
TraesCS6D01G189300.1 Wheat unclear 49.6 50.33
TraesCS2A01G330200.1 Wheat extracellular, plasma membrane, vacuole 49.21 50.13
GSMUA_Achr9P12610_001 Banana endoplasmic reticulum, plasma membrane, plastid 51.98 50.13
TraesCS6B01G226700.2 Wheat golgi 49.34 50.07
TraesCS2D01G332500.1 Wheat golgi 49.08 50.0
HORVU2Hr1G081920.3 Barley plasma membrane 48.94 49.87
TraesCS2B01G352000.1 Wheat extracellular, plasma membrane, vacuole 48.81 49.73
EES05342 Sorghum plasma membrane 49.34 49.67
EES10974 Sorghum golgi 48.94 49.53
HORVU6Hr1G052420.10 Barley extracellular, plasma membrane 49.87 49.41
Zm00001d050917_P002 Maize plasma membrane 49.08 49.4
GSMUA_Achr1P16520_001 Banana extracellular, plasma membrane 48.42 48.87
Zm00001d017036_P002 Maize plasma membrane 49.08 48.19
PGSC0003DMT400033459 Potato endoplasmic reticulum 16.36 47.88
TraesCS7A01G243900.3 Wheat golgi 46.97 46.29
Zm00001d025670_P001 Maize mitochondrion 9.1 45.1
TraesCS7B01G147500.1 Wheat unclear 45.91 45.08
KXG36695 Sorghum plasma membrane 45.25 44.26
GSMUA_Achr3P03920_001 Banana cytosol 45.65 43.8
Bra035774.1-P Field mustard plasma membrane 47.1 43.7
Zm00001d052875_P001 Maize mitochondrion 44.72 43.69
Zm00001d022153_P006 Maize extracellular, mitochondrion 44.72 43.63
Bra002676.1-P Field mustard extracellular, golgi, plasma membrane 43.4 43.58
Bra020384.1-P Field mustard extracellular, plasma membrane 43.4 43.52
Bra020395.1-P Field mustard plasma membrane 42.48 43.11
Bra006785.1-P Field mustard extracellular, plasma membrane 43.93 42.97
TraesCS7D01G242500.1 Wheat golgi, plastid, unclear 45.91 42.96
GSMUA_AchrUn_... Banana extracellular 9.23 42.68
Zm00001d031412_P001 Maize extracellular 41.69 42.42
Bra001790.1-P Field mustard plasma membrane 46.7 42.34
OQU80956 Sorghum cytosol 45.78 39.21
Os02t0187300-01 Rice endoplasmic reticulum, extracellular 1.85 38.89
Bra003814.1-P Field mustard golgi 12.01 23.27
Bra015928.1-P Field mustard extracellular, golgi, vacuole 11.87 22.9
Bra003813.1-P Field mustard cytosol 11.61 21.36
Bra009316.1-P Field mustard extracellular, vacuole 10.16 20.7
Bra015910.1-P Field mustard endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:3.20.20.190MapMan:35.1EnsemblPlantsGene:Bra002904EnsemblPlants:Bra002904.1EnsemblPlants:Bra002904.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0016787
InterPro:GP_PDE_domInterPro:IPR017946InterPro:IPR030395UniProt:M4CFC2PFAM:PF03009InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704PANTHER:PTHR43620PANTHER:PTHR43620:SF1SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI0002544483
SEG:seg:::::
Description
AT5G55480 (E=0.0) SVL1 | SVL1 (SHV3-LIKE 1); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase
Coordinates
chrA10:+:6857093..6861137
Molecular Weight (calculated)
82985.9 Da
IEP (calculated)
5.586
GRAVY (calculated)
-0.010
Length
758 amino acids
Sequence
(BLAST)
001: MLGSRASKFL LSALILIHLL PTQLLAQRSK SPWQTLTGSA PLIIARGGFS GLLPDSSVDA YSIVSQTSVS GAVLWCDVQL TKDGVGICFP DVKMMNASSI
101: QDAYPKRKNS YLVNGVPTQD WFTIDFTLKD LKSVFLIRGI LSRSDAFDNN QYAISTVQDI AMELKPKSFW LNVQHDAFYA QHNLSISKFM LSLPKTVTIN
201: YLSSPEVTFL RSIGGRFGKA GPKFVFRFLE KDDVEVSTNQ TYGTLLGNLT FIKTFASGVL VPKSYIWPLE DQYLSPHTSF VQDAHKAGLE VYASGFANDF
301: DMAYNYSFDP LAEYLSFMDN GDFSVDGFLS DFPLTASSAV DCFSHLGSNA STQVDFLVIS KNGASGDYPG CTDLAYSKAI KDGADIIDCS VQMSLDGIPF
401: CLNSVDLGES TNIVQSPFRN RSATVPEIAP LGGLYSFSLT WSEIQTLRPA ITNPYNRDFN LFRNPKERSS GKLVSLSDFL NLAKSSTSLA GVLISVENAA
501: YLREKQGLDV VKAVLDTLTK AGYSNATTTT KKVMIQSTNS SVLVDFKKQS RYETVYQVEE TIRDILDSAI QDIKKFADAV VVRKNSVFPV SESFTTGQTN
601: LVERLQRFQL PVYVELFRNE FVSQPWDFLS DATVEINSHV TGAGINGTIT EFPLTAARYK RNKCLTRKDL PPYMSPVQPA GLLSIMSPTS LPPAEAPNPV
701: FTDADVTEPP LPPVIAKAPT SSPGPLSTDE KAPNGQTRVT LSLLLSAFAM VLASLLLL
Best Arabidopsis Sequence Match ( AT5G55480.1 )
(BLAST)
001: MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD
101: VKMMNASNIQ DVYPKRKTSY LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL NVQHDAFYAQ HNLSMSSFLL
201: SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV
301: YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL
401: QMSSDGIPFC LSSINLGEST NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG KFVSLSDFLN LAKNSSSLTG
501: VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE
601: SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP
701: PAEAPSPVFT DADVTEPPLP PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL
Arabidopsis Description
GDPDL4Glycerophosphodiester phosphodiesterase GDPDL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ62]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.