Factsheet for Bra020384.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32720	Canola	extracellular, plastid, vacuole	98.55	99.07
Bra020395.1-P	Field mustard	plasma membrane	80.03	80.99
Bra002676.1-P	Field mustard	extracellular, golgi, plasma membrane	80.42	80.53
Bra006785.1-P	Field mustard	extracellular, plasma membrane	78.97	77.03
VIT_11s0206g00140.t01	Wine grape	plasma membrane	58.47	58.93
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, peroxisome	42.46	56.41
GSMUA_Achr4P09430_001	Banana	extracellular	51.32	56.4
KRH20083	Soybean	plasma membrane	52.38	51.83
Os02t0187400-01	Rice	plasma membrane	47.35	50.92
KRH03081	Soybean	extracellular, plasma membrane	51.45	50.92
KXG29647	Sorghum	extracellular, plasma membrane	49.34	49.54
Zm00001d015609_P002	Maize	plasma membrane	49.74	49.41
TraesCS6A01G174100.1	Wheat	extracellular, plasma membrane, vacuole	48.55	49.0
TraesCS6D01G163200.1	Wheat	extracellular, plasma membrane	48.15	48.6
TraesCS6B01G202700.1	Wheat	extracellular, plasma membrane	48.15	48.6
EER90089	Sorghum	extracellular, plasma membrane	48.28	47.96
Bra019073.1-P	Field mustard	extracellular, plasma membrane, plastid	31.08	47.0
PGSC0003DMT400008464	Potato	cytosol	45.24	46.34
Solyc02g014490.2.1	Tomato	unclear	43.78	45.84
Bra004101.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.97	45.76
Bra026409.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.63	45.57
TraesCS1B01G368600.1	Wheat	extracellular, plasma membrane	45.63	45.34
TraesCS1A01G353200.1	Wheat	extracellular, plasma membrane	45.5	45.2
TraesCS1D01G357000.1	Wheat	extracellular, plasma membrane	45.37	45.07
PGSC0003DMT400008461	Potato	cytosol	45.77	44.99
Bra035244.1-P	Field mustard	plasma membrane	44.97	44.85
Bra019092.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.33	44.63
Bra034037.1-P	Field mustard	extracellular, vacuole	42.2	44.55
Solyc02g014530.2.1	Tomato	unclear	46.69	44.4
Bra002904.1-P	Field mustard	extracellular, plasma membrane, vacuole	43.52	43.4
HORVU1Hr1G080970.22	Barley	extracellular, plasma membrane	45.9	42.73
Bra028979.1-P	Field mustard	plasma membrane	41.8	41.25
Bra034040.1-P	Field mustard	extracellular	6.88	38.24
Bra035774.1-P	Field mustard	plasma membrane	40.08	37.09
Bra001790.1-P	Field mustard	plasma membrane	38.89	35.17
Bra035208.1-P	Field mustard	extracellular, golgi, plastid	12.7	35.16
Bra035209.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	39.68	31.12
Bra003814.1-P	Field mustard	golgi	11.64	22.51
Bra003813.1-P	Field mustard	cytosol	12.04	22.09
Bra015928.1-P	Field mustard	extracellular, golgi, vacuole	11.38	21.88
Bra009316.1-P	Field mustard	extracellular, vacuole	10.32	20.97
Bra015910.1-P	Field mustard	endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.1	EnsemblPlantsGene:Bra020384	EnsemblPlants:Bra020384.1	EnsemblPlants:Bra020384.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:GP_PDE_dom	InterPro:IPR017946	InterPro:IPR030395	UniProt:M4DV41	PFAM:PF03009	InterPro:PLC-like_Pdiesterase_TIM-brl
PFscan:PS51704	PANTHER:PTHR43620	PANTHER:PTHR43620:SF3	SUPFAM:SSF51695	SignalP:SignalP-noTM	UniParc:UPI000254306B
SEG:seg	:	:	:	:	:

Description

AT5G58170 (E=0.0) SVL5 | SVL5 (SHV3-LIKE 5); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase

Coordinates

chrA02:+:6488276..6491129

Molecular Weight (calculated)

81335.5 Da

IEP (calculated)

7.920

GRAVY (calculated)

0.027

Length

756 amino acids

Sequence
(BLAST)

001: MLRFLILFSL LIHSCVAPPK TKAAAGALPA KKWLTLSGIL FRKEPAVVAR GGFSGLFPES SATANDLAIS SSSPDLTMLC NLQLTKDGAG FCLSDIRLDN
101: STTISTFLPK GQKTYKVYGQ NLKGWFALDY SADTIFSNVS LVQNIFSRPS IFDGQMSIAA VEDVLDAKPP KFWLSVQYDA FYMEHKLSPA EYIRSLRFSG
201: INVISSPEIG FLKSIGKDAR RAKTKLIFEF KDPETNEPTT NKKYSEILLN LAAIKAFATG IIVPKDYIWP IDSAKYLKPP TTVVTDAHKA GLEVYASGFV
301: NDMLTSYNYS FDPSAEYLQF VDNGQFSVDG FISDFPPTAS QAISCFAHQK RDTPKIGKTL VITHNGASGD YPGCTDLAYQ KAVDDGADVI DCSVQMTKDG
401: MAFCLDSTDL IPTTTAATTL MTRATSVPEI QSKSGIFSFD LTWAEIQSLK PQIQSPFLAA DGFPRNPKNK NAGKFMTLAD FLKFSKAKAV TGVLINVQNA
501: AYLASKKGLG IVDAVKSALT SSKLDKKVLI QSDDSSVLDS FKAVPQYTRV LSIDKEIGDA PKPTIEEIKK HADAVNVLRS SLVTISQSFA TGKTKVVEAM
601: HKGNISVYVS VLRNEYLSIT FDYFSDPTVE LATFIAGNGV DGVITEFPAT ATRYLRSPCS DLYRELSFAI LPAKAGTLVS VASKEAQPPA SAPNPPLDAK
701: DVIDPPLPPV ANLATNNASG GAPPASLRSG TITTTANLSL SLMAMLALGL LLCAGA

Best Arabidopsis Sequence Match ( AT5G58170.1 )
(BLAST)

001: MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV

Arabidopsis Description

GDPDL7Glycerophosphodiester phosphodiesterase GDPDL7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN0]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.