Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58170.1 | EER91265 | AT4G26630.1 | 25387881 |
| AT5G58170.1 | OQU91413 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015609_P002 | Maize | plasma membrane | 88.98 | 88.04 |
| Os02t0187400-01 | Rice | plasma membrane | 62.02 | 66.43 |
| TraesCS6A01G174100.1 | Wheat | extracellular, plasma membrane, vacuole | 62.82 | 63.15 |
| TraesCS6B01G202700.1 | Wheat | extracellular, plasma membrane | 62.68 | 63.02 |
| TraesCS6D01G163200.1 | Wheat | extracellular, plasma membrane | 62.28 | 62.62 |
| EER90089 | Sorghum | extracellular, plasma membrane | 61.35 | 60.71 |
| TraesCS1A01G353200.1 | Wheat | extracellular, plasma membrane | 60.42 | 59.79 |
| TraesCS1B01G368600.1 | Wheat | extracellular, plasma membrane | 60.16 | 59.53 |
| TraesCS1D01G357000.1 | Wheat | extracellular, plasma membrane | 60.03 | 59.4 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, peroxisome | 43.16 | 57.12 |
| GSMUA_Achr4P09430_001 | Banana | extracellular | 52.06 | 56.98 |
| HORVU1Hr1G080970.22 | Barley | extracellular, plasma membrane | 59.36 | 55.05 |
| VIT_11s0206g00140.t01 | Wine grape | plasma membrane | 53.25 | 53.47 |
| Bra020395.1-P | Field mustard | plasma membrane | 49.27 | 49.67 |
| Bra020384.1-P | Field mustard | extracellular, plasma membrane | 49.54 | 49.34 |
| KRH20083 | Soybean | plasma membrane | 49.93 | 49.21 |
| AT5G58170.1 | Thale cress | extracellular, plasma membrane | 48.74 | 48.93 |
| Bra002676.1-P | Field mustard | extracellular, golgi, plasma membrane | 49.0 | 48.87 |
| AT5G58050.1 | Thale cress | extracellular, plasma membrane | 48.87 | 48.87 |
| KRH03081 | Soybean | extracellular, plasma membrane | 49.54 | 48.82 |
| Bra006785.1-P | Field mustard | extracellular, plasma membrane | 49.4 | 48.0 |
| EES10974 | Sorghum | golgi | 43.29 | 43.52 |
| EES05342 | Sorghum | plasma membrane | 42.63 | 42.63 |
| PGSC0003DMT400008464 | Potato | cytosol | 39.84 | 40.65 |
| Solyc02g014490.2.1 | Tomato | unclear | 38.91 | 40.58 |
| PGSC0003DMT400008461 | Potato | cytosol | 41.17 | 40.31 |
| CDY12601 | Canola | extracellular | 7.17 | 39.71 |
| Solyc02g014530.2.1 | Tomato | unclear | 41.83 | 39.62 |
| KXG36695 | Sorghum | plasma membrane | 39.71 | 38.58 |
| OQU80956 | Sorghum | cytosol | 40.24 | 34.24 |
| EER99675 | Sorghum | extracellular | 11.16 | 22.58 |
| EES01511 | Sorghum | extracellular, golgi | 11.55 | 22.25 |
| OQU91395 | Sorghum | extracellular, plasma membrane | 11.55 | 22.19 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.1 | UniProt:A0A194YN67 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:GP_PDE_dom | InterPro:IPR017946 |
| InterPro:IPR030395 | EnsemblPlants:KXG29647 | ProteinID:KXG29647 | ProteinID:KXG29647.1 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl |
| PFscan:PS51704 | PANTHER:PTHR43620 | PANTHER:PTHR43620:SF3 | EnsemblPlantsGene:SORBI_3004G070600 | SUPFAM:SSF51695 | SignalP:SignalP-noTM |
| UniParc:UPI0003C669CF | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:5709610..5713683
Molecular Weight (calculated)
81374.5 Da
IEP (calculated)
5.510
GRAVY (calculated)
0.083
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASYPHMFL ILLLLQGASA ALKPPAGPKW LTLSGLPPLV IARGGFSGLF PDSSQFAYQF ALTACLPDVV LLCDLQLSSD RIGFCKTGLT LDNSTTVSEI
101: FPKMERTYKL HGEDVRGWFS LDFTAEQLAQ NVSLIQNIFS RPSTFDGSLR MYPLDEVVEL HPPQIWLNVQ YNSFFLEHKL SSEDYILELP KDTLSYISSP
201: EIEFLKSLGG KLKKAKTKLI FRLLNEDIEE PSTKKTYGEL LKDLKSIKEF AVGILVPKTY IWPVEKDQYL APSPTSLVKD AHAIGLEVYA SGFANDIVLS
301: YNYSYDPSAE YLQFIDNPDF SVDGVLTDFP VTASGAVACM AHSKGNPLPP PGKSRPLIIT HNGASGMFAG STDLAYQEAI KDAADIIDCT VQMSKDGTAF
401: CMHSADISSS TTAATAFASK ASTVHEIQNK SGIFSFDLSW SEIATLRPAL VSPFAQAGMQ RNPLAKNAGK LMTLPHFLDL AKASNITGIL IEIEHAAYLA
501: KRGIGIVEAV SSALTKAGYD KETKQQVFVQ SDDSSVLEAF KKFKTFRRVL NIEAKISGAS KPSLDDIKKF ADTVRINRNS VAQITGYFMT HFTDTVGSLQ
601: AANLTVFVGV LKNEFMNLGF DFFADPTIEV ATYAYSVVAD GIVTDYPATA ASYFRSPCSD MKLNLSYSIL PAQPGALVNL AAPGMLAPAG APAPLLQPTD
701: VVDPPLPPVK AVITADAPAP KAADNTSSAF SSNTANGLLW AGVVALLSLT FLH
101: FPKMERTYKL HGEDVRGWFS LDFTAEQLAQ NVSLIQNIFS RPSTFDGSLR MYPLDEVVEL HPPQIWLNVQ YNSFFLEHKL SSEDYILELP KDTLSYISSP
201: EIEFLKSLGG KLKKAKTKLI FRLLNEDIEE PSTKKTYGEL LKDLKSIKEF AVGILVPKTY IWPVEKDQYL APSPTSLVKD AHAIGLEVYA SGFANDIVLS
301: YNYSYDPSAE YLQFIDNPDF SVDGVLTDFP VTASGAVACM AHSKGNPLPP PGKSRPLIIT HNGASGMFAG STDLAYQEAI KDAADIIDCT VQMSKDGTAF
401: CMHSADISSS TTAATAFASK ASTVHEIQNK SGIFSFDLSW SEIATLRPAL VSPFAQAGMQ RNPLAKNAGK LMTLPHFLDL AKASNITGIL IEIEHAAYLA
501: KRGIGIVEAV SSALTKAGYD KETKQQVFVQ SDDSSVLEAF KKFKTFRRVL NIEAKISGAS KPSLDDIKKF ADTVRINRNS VAQITGYFMT HFTDTVGSLQ
601: AANLTVFVGV LKNEFMNLGF DFFADPTIEV ATYAYSVVAD GIVTDYPATA ASYFRSPCSD MKLNLSYSIL PAQPGALVNL AAPGMLAPAG APAPLLQPTD
701: VVDPPLPPVK AVITADAPAP KAADNTSSAF SSNTANGLLW AGVVALLSLT FLH
001: MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
101: SSVFPKAQKT YKVNGQDLKG WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLQFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAVD DGADVIDCSV QMSKDGIAFC
401: HDAADLTAST TAMTIFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF ITLADFLDFS KAKAVTGVMI NIENAAYLAS
501: KKGLGVVDAV KSALAKSTLD KQSTQKVLIQ SDDSSVLASF EAVPPYTRVL SIDKEIGGAP KPSVDEIKKY AEAVNLLRTS LVTVSQSFTT GKTNVVEEMH
601: KGNISVYVSV LRNEYISVAF DYFSDPTIEL ATFISGSGVD GVITEFPATA TRYLKSPCSD LNKEQPYAIL PAEAGGLVVV ADKEAQPPAS APNPPLEAKD
701: VIDPPLPPVA NLAASNATGG AQSHPPPASG TVANAANLGL SLLAMLALGV
Arabidopsis Description
GDPDL7Glycerophosphodiester phosphodiesterase GDPDL7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN0]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.