Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 4
- plasma membrane 6
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58170.1 | KRG98502 | AT4G26630.1 | 25387881 |
| AT5G58170.1 | KRG98507 | AT4G26630.1 | 25387881 |
| AT5G58170.1 | KRH46360 | AT4G26630.1 | 25387881 |
| AT5G58170.1 | KRH46364 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03081 | Soybean | extracellular, plasma membrane | 90.18 | 90.18 |
| VIT_11s0206g00140.t01 | Wine grape | plasma membrane | 56.02 | 57.07 |
| AT5G58050.1 | Thale cress | extracellular, plasma membrane | 53.53 | 54.32 |
| CDY32730 | Canola | plasma membrane | 52.75 | 54.09 |
| CDY02788 | Canola | plasma membrane | 52.62 | 53.96 |
| Bra002676.1-P | Field mustard | extracellular, golgi, plasma membrane | 53.01 | 53.64 |
| Bra020395.1-P | Field mustard | plasma membrane | 52.36 | 53.55 |
| AT5G58170.1 | Thale cress | extracellular, plasma membrane | 52.23 | 53.2 |
| CDY43885 | Canola | extracellular, golgi, plasma membrane | 51.96 | 52.86 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, peroxisome | 39.27 | 52.72 |
| CDY32720 | Canola | extracellular, plastid, vacuole | 51.57 | 52.39 |
| Bra020384.1-P | Field mustard | extracellular, plasma membrane | 51.83 | 52.38 |
| GSMUA_Achr4P09430_001 | Banana | extracellular | 47.12 | 52.33 |
| CDY02800 | Canola | extracellular, plasma membrane, plastid | 51.05 | 52.14 |
| CDX88656 | Canola | plasma membrane | 52.23 | 51.48 |
| Bra006785.1-P | Field mustard | extracellular, plasma membrane | 52.09 | 51.35 |
| Zm00001d015609_P002 | Maize | plasma membrane | 50.0 | 50.2 |
| CDY11831 | Canola | extracellular, vacuole | 37.04 | 50.0 |
| KXG29647 | Sorghum | extracellular, plasma membrane | 49.21 | 49.93 |
| TraesCS6A01G174100.1 | Wheat | extracellular, plasma membrane, vacuole | 48.17 | 49.13 |
| TraesCS6B01G202700.1 | Wheat | extracellular, plasma membrane | 47.91 | 48.87 |
| TraesCS6D01G163200.1 | Wheat | extracellular, plasma membrane | 47.77 | 48.73 |
| Os02t0187400-01 | Rice | plasma membrane | 43.98 | 47.8 |
| CDY11832 | Canola | cytosol, peroxisome, plastid | 9.55 | 47.71 |
| EER90089 | Sorghum | extracellular, plasma membrane | 46.99 | 47.17 |
| CDX71386 | Canola | extracellular | 11.52 | 46.56 |
| Solyc02g014490.2.1 | Tomato | unclear | 42.67 | 45.15 |
| TraesCS1A01G353200.1 | Wheat | extracellular, plasma membrane | 44.76 | 44.94 |
| TraesCS1D01G357000.1 | Wheat | extracellular, plasma membrane | 44.63 | 44.81 |
| TraesCS1B01G368600.1 | Wheat | extracellular, plasma membrane | 44.37 | 44.55 |
| PGSC0003DMT400008464 | Potato | cytosol | 42.93 | 44.44 |
| PGSC0003DMT400008461 | Potato | cytosol | 44.5 | 44.21 |
| Solyc02g014530.2.1 | Tomato | unclear | 45.29 | 43.52 |
| KRH46280 | Soybean | cytosol | 14.79 | 42.97 |
| KRH14296 | Soybean | endoplasmic reticulum | 41.23 | 41.78 |
| KRH73850 | Soybean | endoplasmic reticulum | 40.97 | 41.57 |
| HORVU1Hr1G080970.22 | Barley | extracellular, plasma membrane | 43.85 | 41.26 |
| KRH46279 | Soybean | extracellular | 38.61 | 40.58 |
| KRG98625 | Soybean | extracellular | 38.22 | 40.44 |
| KRH46281 | Soybean | extracellular, golgi, plasma membrane | 39.4 | 39.55 |
| KRH46282 | Soybean | extracellular, plasma membrane | 38.48 | 38.63 |
| KRG98622 | Soybean | extracellular, golgi, plasma membrane | 37.57 | 38.32 |
| KRH56805 | Soybean | nucleus | 11.13 | 21.68 |
| KRH03139 | Soybean | extracellular, golgi | 10.99 | 21.65 |
Protein Annotations
| EntrezGene:100794640 | Gene3D:3.20.20.190 | MapMan:35.1 | EMBL:ACUP02008239 | ncoils:Coil | EnsemblPlantsGene:GLYMA_13G155100 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:GP_PDE_dom | UniProt:I1LZL5 | InterPro:IPR017946 | InterPro:IPR030395 | EnsemblPlants:KRH20083 |
| ProteinID:KRH20083 | ProteinID:KRH20083.1 | PFAM:PF03009 | InterPro:PLC-like_Pdiesterase_TIM-brl | PFscan:PS51704 | PANTHER:PTHR43620 |
| PANTHER:PTHR43620:SF3 | SUPFAM:SSF51695 | SignalP:SignalP-noTM | UniParc:UPI000233D1D3 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:-:27037439..27041703
Molecular Weight (calculated)
82268.4 Da
IEP (calculated)
6.722
GRAVY (calculated)
-0.056
Length
764 amino acids
Sequence
(BLAST)
(BLAST)
001: MNISFWEKKK MFRSLFLISL LLHTIVAQKP ALPNLPTPQV PPQKWSTLSG NEPLVIARGG FSGLFPEGSP DAIGLSQGIS VFLCNLQVAK DGGAFCVTGT
101: TLDNTTTISL VDPKEKTYNV DGKDVRGHFS LDYPGLLIDQ NVSMTQAIFS RPNFYDGTSP VLNLDALLSG KSPPRLWLNV QNAALYTENG VQVVDIVLEL
201: LSFYQIEFVS STSIGFLKSI SGKSNKATKV VFKLLNNNKV EPSTKKPYGS IVKDLATIKS FASGIMVPKE YIWPVKPDKY LGPPTTLVAD AHKSGLEVYA
301: SGFANDFFSS YSYNYDPIAE YLQFLDRGDS VDGVVTDFPA TASNAIACFA HNNTLPKKGP TLIISNNGAS GVYPGSTDLA YQQAIDDGAD IIDCSVQMTK
401: DGIAFCSNST DLTSDTTAMP KFMSRSSNVP ELQPKSGIFS FDLTWSEIQT LKPQMVSKGS DFLRNPANKT SGKFVTLSAF LELAKAKAVP GILVNIQNAP
501: YLASQKGLDI VDAVSTALSN ATFDKQAKQQ VLIQSDDSSV LSRFKDIPSY KRVMLLKDKM GDVPRQTVEE IKKHADAVNL PKTSIIKVSN SILVGMTNVV
601: KELKDANLTV FVHNLKNEYT TLAFDYWSDP NVEIATYVQT AKVDGIVTDF PATASRFMRS PCSDPTHDPT ILPAKPGDLL NTIPTELLPP AQAPLPPLEV
701: ADVVDPPLPA VTKNSNSTKA EPAAGPGAKP ASPPASPSGA RVNVANSGLS IVAILVFAML FAAH
101: TLDNTTTISL VDPKEKTYNV DGKDVRGHFS LDYPGLLIDQ NVSMTQAIFS RPNFYDGTSP VLNLDALLSG KSPPRLWLNV QNAALYTENG VQVVDIVLEL
201: LSFYQIEFVS STSIGFLKSI SGKSNKATKV VFKLLNNNKV EPSTKKPYGS IVKDLATIKS FASGIMVPKE YIWPVKPDKY LGPPTTLVAD AHKSGLEVYA
301: SGFANDFFSS YSYNYDPIAE YLQFLDRGDS VDGVVTDFPA TASNAIACFA HNNTLPKKGP TLIISNNGAS GVYPGSTDLA YQQAIDDGAD IIDCSVQMTK
401: DGIAFCSNST DLTSDTTAMP KFMSRSSNVP ELQPKSGIFS FDLTWSEIQT LKPQMVSKGS DFLRNPANKT SGKFVTLSAF LELAKAKAVP GILVNIQNAP
501: YLASQKGLDI VDAVSTALSN ATFDKQAKQQ VLIQSDDSSV LSRFKDIPSY KRVMLLKDKM GDVPRQTVEE IKKHADAVNL PKTSIIKVSN SILVGMTNVV
601: KELKDANLTV FVHNLKNEYT TLAFDYWSDP NVEIATYVQT AKVDGIVTDF PATASRFMRS PCSDPTHDPT ILPAKPGDLL NTIPTELLPP AQAPLPPLEV
701: ADVVDPPLPA VTKNSNSTKA EPAAGPGAKP ASPPASPSGA RVNVANSGLS IVAILVFAML FAAH
001: MLRFFILFSL FLHSSVAAPK TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSISA NDLAIGTSSP GFTMLCNLQM TKDGVGLCLS DIRLDNATTI
101: SSVFPKAQKT YKVNGQDLKG WFVIDYDADT IFNKVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLRFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAID DGADIIDCSV QMSKDGIAFC
401: HDAADLSAST TARTTFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF TTLADFLELG KAKAVTGVLI NIQNAAYLAS
501: KKGLGVVDVV KSALTNSTLD KQSTQKVLIQ SDDSSVLSSF EAVPPYTRVL SIDKEIGDAP KTSIEEIKKH ADAVNLLRTS LITVSQSFAT GKTNVVEEMH
601: KANISVYVSV LRNEYIAIAF DYFSDPTIEL ATFIAGRGVD GVITEFPATA TRYLRSPCSD LNKDQPYAIL PADAGALLTV ADKEAQLPAI PPNPPLDAKD
701: VIDPPLPPVA KLASNGTEGG PPQTPPRSGT VAIAANLSLS LLAMMALGLL YTA
101: SSVFPKAQKT YKVNGQDLKG WFVIDYDADT IFNKVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME HKLSPAEYLR SLRFRGINVI
201: SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR
301: TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPTASQSIT CFSHQNGNLP KAGHALVITH NGASGDYPGC TDLAYQKAID DGADIIDCSV QMSKDGIAFC
401: HDAADLSAST TARTTFMSRA TSVPEIQPTN GIFSFDLTWA EIQSVKPQIE NPFTATGFQR NPANKNAGKF TTLADFLELG KAKAVTGVLI NIQNAAYLAS
501: KKGLGVVDVV KSALTNSTLD KQSTQKVLIQ SDDSSVLSSF EAVPPYTRVL SIDKEIGDAP KTSIEEIKKH ADAVNLLRTS LITVSQSFAT GKTNVVEEMH
601: KANISVYVSV LRNEYIAIAF DYFSDPTIEL ATFIAGRGVD GVITEFPATA TRYLRSPCSD LNKDQPYAIL PADAGALLTV ADKEAQLPAI PPNPPLDAKD
701: VIDPPLPPVA KLASNGTEGG PPQTPPRSGT VAIAANLSLS LLAMMALGLL YTA
Arabidopsis Description
GDPDL6Glycerophosphodiester phosphodiesterase GDPDL6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGT9]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.