Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46364 | Soybean | nucleus | 76.71 | 69.39 |
| KRG98507 | Soybean | nucleus | 62.05 | 61.63 |
| KRH46360 | Soybean | nucleus | 62.47 | 61.62 |
| VIT_19s0015g00430.t01 | Wine grape | nucleus | 39.59 | 48.25 |
| CDX94304 | Canola | nucleus | 27.26 | 45.54 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 18.77 | 39.37 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 36.16 | 38.65 |
| Solyc07g065490.2.1 | Tomato | nucleus | 33.56 | 38.64 |
| CDX89318 | Canola | nucleus | 34.93 | 36.22 |
| Solyc10g006000.2.1 | Tomato | nucleus | 27.26 | 35.92 |
| AT5G55660.1 | Thale cress | nucleus | 36.3 | 34.06 |
| CDY06563 | Canola | nucleus | 31.23 | 33.19 |
| AT4G26630.1 | Thale cress | nucleus | 34.52 | 33.03 |
| KRH41110 | Soybean | nucleus | 21.37 | 32.03 |
| Bra026415.1-P | Field mustard | nucleus | 35.75 | 31.26 |
| Bra035582.1-P | Field mustard | nucleus | 33.7 | 30.98 |
| CDY28645 | Canola | nucleus | 33.56 | 30.9 |
| KRH59791 | Soybean | nucleus | 22.05 | 30.61 |
| KRH63796 | Soybean | nucleus | 22.19 | 30.28 |
| CDY20754 | Canola | nucleus | 32.74 | 30.1 |
| KRH54152 | Soybean | nucleus | 22.47 | 29.87 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 33.56 | 28.32 |
| CDY17352 | Canola | extracellular, vacuole | 31.64 | 27.9 |
| Os03t0596900-01 | Rice | nucleus | 25.21 | 26.17 |
| Zm00001d013757_P010 | Maize | nucleus | 22.74 | 25.42 |
| EER91265 | Sorghum | nucleus | 22.33 | 25.27 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 10.82 | 24.61 |
| Zm00001d033159_P001 | Maize | nucleus | 14.66 | 23.94 |
| Bra010432.1-P | Field mustard | nucleus | 33.42 | 21.57 |
| CDX97358 | Canola | nucleus | 33.97 | 20.45 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 23.7 | 17.8 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 23.7 | 17.69 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 23.97 | 17.66 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 23.7 | 17.27 |
| OQU91413 | Sorghum | nucleus | 21.23 | 11.47 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A0R0EXM9 | EMBL:ACUP02010893 | ncoils:Coil | InterPro:DEK_C | EnsemblPlantsGene:GLYMA_18G0776001 |
| GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006338 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042393 | GO:GO:2000779 |
| EnsemblPlants:KRG98502 | ProteinID:KRG98502 | ProteinID:KRG98502.1 | PFAM:PF08766 | PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 |
| SUPFAM:SSF109715 | UniParc:UPI0006ED78D1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:7372603..7379403
Molecular Weight (calculated)
82914.2 Da
IEP (calculated)
5.492
GRAVY (calculated)
-1.511
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEESVNEV SKTDSNGKSF QEKTLDEITE KKDLETDGGK VLENNGIKKN IVKEIEDKKA VGVEKVEEDK KNGVVEDAKE DKKEDEVKEA KEDKKEVVEE
101: VKEDNKEDGV EEAKENKKED GVEEVKEVKE VDGVKEIKED KEVDGVKEVK EDKEVDGVKE VVEDKKSDEL KEIEEDKKDD HISENDKMDE DTEVKETIEG
201: KQENEKVEAE KPEVDAMEVE SGIPQKEGSD KKEKKDVAME EEDEDEGKDN IDKSKEEEKA EDSKGEKRSK KRGRGNINGE KVKEKRKELK KTEPRTPTID
301: RPVRERKSVE RLVASIEKDA TKEFHIEKGR GTPLKDIPNV AFKLSRRKTE DTFKLLHTIL FGRRGKAVEI KSNISRFSGF VWRENEEKQM IKVKEKLDKC
401: NKEKLLEFCD VLDLTIARPT TRKEDIIAVL IDFLVAPHAT TTVLLAEKDK SSKGKKRKHV VKQGSSRSAT TSRRSAKSQK KNEDSSVVRR KSTSDTEDES
501: EEDEKDEENE EENENGVPDK SEDETPEKSE SEDKSDSGSE SEDTKEKKKP KTSSTKKESA KKSKIEKIKV ATKSRSPQKR TPKKSSSNLS KSDDDSDESP
601: NPKVFSRKKK NEKGGKQKID DSDESPNPKV FSRKKKNEKG GKKKIDDDSD ESPNPKVFSR KKKEKGGKQK RSTPTKSASK ERTAEKVTKG KGKKKEKSSL
701: SDNQLRDAIC EILKEVDFNT ATFTDILRQL
101: VKEDNKEDGV EEAKENKKED GVEEVKEVKE VDGVKEIKED KEVDGVKEVK EDKEVDGVKE VVEDKKSDEL KEIEEDKKDD HISENDKMDE DTEVKETIEG
201: KQENEKVEAE KPEVDAMEVE SGIPQKEGSD KKEKKDVAME EEDEDEGKDN IDKSKEEEKA EDSKGEKRSK KRGRGNINGE KVKEKRKELK KTEPRTPTID
301: RPVRERKSVE RLVASIEKDA TKEFHIEKGR GTPLKDIPNV AFKLSRRKTE DTFKLLHTIL FGRRGKAVEI KSNISRFSGF VWRENEEKQM IKVKEKLDKC
401: NKEKLLEFCD VLDLTIARPT TRKEDIIAVL IDFLVAPHAT TTVLLAEKDK SSKGKKRKHV VKQGSSRSAT TSRRSAKSQK KNEDSSVVRR KSTSDTEDES
501: EEDEKDEENE EENENGVPDK SEDETPEKSE SEDKSDSGSE SEDTKEKKKP KTSSTKKESA KKSKIEKIKV ATKSRSPQKR TPKKSSSNLS KSDDDSDESP
601: NPKVFSRKKK NEKGGKQKID DSDESPNPKV FSRKKKNEKG GKKKIDDDSD ESPNPKVFSR KKKEKGGKQK RSTPTKSASK ERTAEKVTKG KGKKKEKSSL
701: SDNQLRDAIC EILKEVDFNT ATFTDILRQL
001: MATETLELKT PQLADTVAVT EKDTETKKKD EVEKDEAMEE KGEEIDGEKV KSPVTPVSER PIRERKRTGR YVIDTPPRSS GNKPLSITQG RGTRLKEIPN
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
Arabidopsis Description
At3g48710 [Source:UniProtKB/TrEMBL;Acc:Q9SMM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.