CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
peroxisome 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92211	Soybean	cytosol	96.43	96.33
CDY09035	Canola	cytosol, mitochondrion	74.37	77.63
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	74.37	77.55
Bra014964.1-P	Field mustard	cytosol, nucleus, peroxisome	76.05	76.53
CDX77496	Canola	cytosol	76.05	76.53
CDX85114	Canola	cytosol, mitochondrion, nucleus	75.95	76.43
CDY18110	Canola	cytosol	74.89	75.85
Solyc09g091850.2.1	Tomato	cytosol	74.47	75.75
AT3G24180.1	Thale cress	mitochondrion	75.11	75.26
Bra028320.1-P	Field mustard	cytosol, mitochondrion	75.0	73.99
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	46.64	72.91
KRH39051	Soybean	cytosol, extracellular, plastid	3.68	61.4
KRH51297	Soybean	cytosol	45.27	46.29

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	EntrezGene:100817476	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf
InterPro:6hp_glycosidase-like_sf	EMBL:ACUP02006610	InterPro:B_Glucosidase_GBA2-typ	ncoils:Coil	InterPro:GH116_N	InterPro:GH116_catalytic
EnsemblPlantsGene:GLYMA_10G192400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004348	GO:GO:0004553	GO:GO:0005575
GO:GO:0006629	GO:GO:0006680	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	UniProt:I1LCH2	InterPro:IPR012341	EnsemblPlants:KRH34577
ProteinID:KRH34577	ProteinID:KRH34577.1	PFAM:PF04685	PFAM:PF12215	PIRSF:PIRSF028944	PANTHER:PTHR12654
PANTHER:PTHR12654:SF3	SUPFAM:SSF48208	UniParc:UPI000296C8D4	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:42475154..42487321

Molecular Weight (calculated)

106978.0 Da

IEP (calculated)

6.390

GRAVY (calculated)

-0.410

Length

952 amino acids

Sequence
(BLAST)

001: MVSGNIFHCR KNSWPPQEYI SKSTLQLFDY DSSAPPEQAW RRRLNSHANL LKEFRVTFTE AIKMVRLGIR IWSYVREEAS HGRKAPIDPF TRESCKPSAS
101: QGVPLGGMGS GSISRGFRGE FRQWQIIPSL CEASPVMSNQ FSIFISREGG KKKFASVLAP GQHEGLGSSR KPDDQGISSW GWNLSGQHST YHALFPRAWT
201: VYDGEPDPEL KISCRQISPF IPHNYRESSL PAAVFVYTLV NTGKERAKVS LLFTWANSIG GSSHSSGDHV NEPFKAEDGV SGVLLYHKTA KGNPPVTFAI
301: AACETQNVNV SVLPSFGLSE ESSMTAKHMW SKMVKDGQFD QENFNSGPSM PSSPGETLCA AVAASTWVEP HGKCTVAFSL AWSSPKVKFV KGSTFNRRYT
401: KFYGTSEKAA ADLAHDALTH YNRWEEEIEK WQNPVLKDEA LPEWYKFTLF NELYFLVAGG TIWIDSPVLS SNMRNDQDRV RELESAVVKE TEDKMSDRKR
501: TVVESTTDST YDSAVITGHD RADEKLYEDD DDVGRFLYLE GVEYIMWCTY DVHFYASFAL LELFPRIELN IQRDFARAVL CEDGRKVKFL AEGNWGIRKV
601: YGAVPHDLGT HDPWHEMNAY NIHDTSKWKD LNPKFVLQVY RDFATTGDLQ FGVDVWPAVR AAMEYMEQFD RDGDGLIEND GFPDQTYDTW TVHGVSTYCG
701: CLWLAALQAA AVMALELGDR EFAETCKRKF LKAKPAFEEK LWNGTYFNYD SGSSGNSKSI QADQLAGQWY TASSGLPSLF EDSKIKSALR KVYDFNVMKV
801: KGGRMGAVNG MHPNGKVDET CMQSREVWTG VTYGLAATMI HAGMEEEAFT TAEGIFLAGW SEDGYGYWFQ TPEAWTMDGH YRSLMYMRPL AIWGMQYAIN
901: RPKAILEAPK INIMDRIHLS PVIGGYSHNE TGVRKIATKA GCFSNSVFNC AC

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.