Factsheet for PGSC0003DMT400076302

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0444000-02	Rice	cytosol, golgi	38.1	70.95
GSMUA_Achr4P26470_001	Banana	cytosol	70.44	66.61
Solyc09g091850.2.1	Tomato	cytosol	89.82	58.44
PGSC0003DMT400064004	Potato	cytosol, nucleus, plastid	48.44	48.2
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	71.1	47.43
CDY09035	Canola	cytosol, mitochondrion	70.11	46.82
KRG92211	Soybean	cytosol	73.23	46.8
KRH34577	Soybean	cytosol	72.91	46.64
AT3G24180.1	Thale cress	mitochondrion	72.09	46.21
CDY18110	Canola	cytosol	71.1	46.06
TraesCS1D01G149100.2	Wheat	cytosol	71.92	45.96
Bra014964.1-P	Field mustard	cytosol, nucleus, peroxisome	70.77	45.56
CDX77496	Canola	cytosol	70.77	45.56
CDX85114	Canola	cytosol, mitochondrion, nucleus	70.61	45.45
Bra028320.1-P	Field mustard	cytosol, mitochondrion	71.43	45.08
TraesCS1B01G169600.1	Wheat	cytosol	71.76	45.05
Os10t0473400-01	Rice	plastid	71.92	44.97
KXG38347	Sorghum	cytosol	71.43	44.66
TraesCS1A01G152200.2	Wheat	cytosol	71.76	44.64
OQU75660	Sorghum	mitochondrion	67.32	44.23
Zm00001d005431_P006	Maize	mitochondrion	66.67	44.08
HORVU1Hr1G049550.3	Barley	mitochondrion	65.68	43.62
TraesCS1A01G183900.2	Wheat	mitochondrion	65.52	43.56
TraesCS1D01G192800.1	Wheat	mitochondrion	64.2	42.45
GSMUA_Achr4P30190_001	Banana	cytosol, peroxisome, plastid	63.22	41.53
Zm00001d032725_P001	Maize	cytosol	71.92	41.01
TraesCS1B01G205400.1	Wheat	mitochondrion	63.55	40.48
PGSC0003DMT400002617	Potato	cytosol	50.25	32.31
GSMUA_Achr4P26460_001	Banana	cytosol	0.33	0.67
PGSC0003DMT400063999	Potato	cytosol	0.33	0.62
TraesCS3D01G524900.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
InterPro:GH116_N	InterPro:GH116_catalytic	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0016787
InterPro:IPR012341	UniProt:M1CWI7	PFAM:PF04685	PFAM:PF12215	EnsemblPlantsGene:PGSC0003DMG400029664	PGSC:PGSC0003DMG400029664
EnsemblPlants:PGSC0003DMT400076302	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	SUPFAM:SSF48208	UniParc:UPI000295BCBE	SEG:seg

Description

Non-lysosomal glucosylceramidase [Source:PGSC_GENE;Acc:PGSC0003DMG400029664]

Coordinates

chr9:-:58747188..58756210

Molecular Weight (calculated)

68510.6 Da

IEP (calculated)

5.597

GRAVY (calculated)

-0.360

Length

609 amino acids

Sequence
(BLAST)

001: MVQDGHFDRE NFSKGPSMPS SPGETHCAAV SASAWVEPHG KCTVAFSVAW SSPQVKFMKG MSYYRRYTRF YGTSERAAVD LVHHSLTNYK LWEEEIEKWQ
101: NPILNDDNLP EWYKFTLFNE LYFLVAGGTV WIDSGVPSSD SVSTRTARPE VTKVKSIKNG VQVEQTAYNG YGEDNQLSSP DKLSGSSTDG DDVGRFLYLE
201: GVEYVMWCTY DVHFYASFAL LALFPKIELS IQREFAKAVL CEDGRKVKFL AEGNWGIRKP RGAIPHDLGM HDPWHEMNAY NIHDTSKWKD LNPKFVLQVY
301: RDFAATGDFS FATEVWPSVC AAMEYMDQFD HDNDCLIEND GFPDQTYDTW TVHGISAYCG GLWLAALQAA AAMAMHVGDY AFAEKYKGKL IKAKTVYEEK
401: LWNGSYFNYD SGSSSNSKSI QADQLAGQWY MASSGLPDLF DGVKIKSALQ KIYDFNVMKV RGGRMGAVNG MHPNGKVDDT CMQSREIWTG VTYGVAATML
501: HAGMEEQAFT TAEGIFTAGW SEDGYGYSFQ TPEGWTTDGH FRSLIYMRPL SIWGMQWALS MPKTILDAPQ VNIMDRIQVN PYTPQETGVR KIVKKAKCCF
601: NNSIFSCSC

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.