Factsheet for TraesCS1A01G183900.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G049550.3	Barley	mitochondrion	97.6	97.49
TraesCS1D01G192800.1	Wheat	mitochondrion	95.63	95.11
TraesCS1B01G205400.1	Wheat	mitochondrion	95.96	91.95
Os07t0444000-02	Rice	cytosol, golgi	31.11	87.16
OQU75660	Sorghum	mitochondrion	87.45	86.41
Zm00001d005431_P006	Maize	mitochondrion	85.7	85.23
CDY09035	Canola	cytosol, mitochondrion	70.52	70.83
TraesCS1A01G152200.2	Wheat	cytosol	74.02	69.25
CDX85114	Canola	cytosol, mitochondrion, nucleus	71.4	69.13
CDX77496	Canola	cytosol	71.29	69.03
Bra014964.1-P	Field mustard	cytosol, nucleus, peroxisome	71.29	69.03
AT3G24180.1	Thale cress	mitochondrion	71.51	68.95
CDY18110	Canola	cytosol	70.74	68.94
Solyc09g091850.2.1	Tomato	cytosol	70.2	68.7
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	68.34	68.57
Bra028320.1-P	Field mustard	cytosol, mitochondrion	71.07	67.46
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	43.56	65.52
TraesCS4A01G226400.1	Wheat	cytosol	49.34	47.43
TraesCS7A01G320000.1	Wheat	plasma membrane, vacuole	45.41	46.95
KRH39051	Soybean	cytosol, extracellular, plastid	2.84	45.61
TraesCS7A01G320400.1	Wheat	cytosol	44.1	41.44

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
InterPro:B_Glucosidase_GBA2-typ	InterPro:GH116_N	InterPro:GH116_catalytic	GO:GO:0003674	GO:GO:0003824	GO:GO:0004348
GO:GO:0004553	GO:GO:0005575	GO:GO:0006629	GO:GO:0006680	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	InterPro:IPR012341	PFAM:PF04685
PFAM:PF12215	PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	SUPFAM:SSF48208	EnsemblPlantsGene:TraesCS1A01G183900
EnsemblPlants:TraesCS1A01G183900.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:333868912..333886212

Molecular Weight (calculated)

103127.0 Da

IEP (calculated)

6.812

GRAVY (calculated)

-0.384

Length

916 amino acids

Sequence
(BLAST)

001: MPRGKSSSGG SLFYRRKHSW RRDELVSRST LHLLDFDDGT PPEHAWRRKL SSHANRLKEF NVTFREAFKM MKLGLRLWSY VREEASHGRK APIDPFTRES
101: SKPSASQGVP LGGMGTGSIS RGFRGEFKHW QITPGSCDMS PVMENQFSIF ITREGGSKKY SSVLAPGQHD GLKKSSDDGI SSWDWKLRGD RSTYHALFPR
201: AWTVYDGEPD PELKLSCRQI SPFIPHNYEE SSLPVSIFVY TLVNTGKERA KVSLVMTWAN SIGGLSHQSG GHVNEPFIGE NGISGVLLHH KTANNNPPVT
301: FAVAARENQN VDVTVLPIFG LSGESSVTAK EMWGTMVQGG CFDQDNFNAG PSMPSSVGDT VCAAVSASTW VEPHGRCTVV FALAWSSPEV KFKKGSRYHR
401: RYTKFYGTSP RSAINLAQDA LMKYKHWEEE IDKWQTPILR DERLPEWYKI TLFNELYFLV AGGTVWIDSD LSSSLPEDSD LPLHNSTCNS TVPLIGSSPP
501: DFDDKENVGK FLYLEGVEYF MWCTYDVHFY ASFALLDLFP KIELSIQRDF ARAVLREDRT RVRFLADGTW GTRKVIGAVP HDLGAHDPWH ELNAYNIHDT
601: SRWKDLNPKF VLQVYRDFAA TDDMSFGKDV WPAVCTAMEY IEQFDRDGDC MIENDGFPDQ TYDAWTVLGV SAYCGCLWLA ALQAAAAMAR SLGHDDYADR
701: CMVKFAKAKH VFEAKLWNGS YFNYDSGTSY SSRSIQADQL AGQWYTASSG LPPLFDEDRI KCTLQKIFDY NVMRVKGGRI GAVNGMHPNG KVDETCMQSR
801: EIWTGVTYSL AATMLLHGME DQAFTTAQGI FLAGWSEEGY GYWFQTPEAW TIDGHYRSLI YMRPLAIWAM QHVLSPPRAI LEAPKVNTME RAYVSPGALQ
901: FLQDSVRKIT PKSGCF

Best Arabidopsis Sequence Match ( AT1G33700.3 )
(BLAST)

001: MQNVPEDQNK MVIDDKLPPF SWERKLNSQA KTPSEFKLSK RDHMHLFPLG YRLWRHTKDE AAKGRASIFD IFRKHHITGD HGVPLGGIGS GSIGRSYKGE
101: FQQFKLFPKI CEEAPILTNQ FSAFVSRPGG VKHSTVLCPS KPQVVKDNGG YLCQGQAPNM GIESWDWNMT GEKSTYHALY PRSWTVYDGE PDPELRIVSR
201: QVSPFIPHNY EESSLPVSVF NFTVTNTGAE PAIVTLLFTW ENSVGGASGL TGQHFNSTMK AKDGVHAVAL QHKTANGHPP VSYAIAAKET EDVRVSSCPC
301: FIVSGTTPNQ ITAGDMWDEI KKNASFDKLT SNACSPSKPG TSIGAAIAAK VKVPPGCDRT VTFSLSWDCP EARFDEKTYH RRYTRFYGSL GNAAVAMAHD
401: ALLNFPEWET QIEEWQAPVL ADTTLPEWYR VTLFNELYYF NSGGTMWTDG LPPKQSLDSI GRRKISLGLS TIDKNDQDQN NVALDILGRI DAVCSQIHAP
501: LTSNAALGNT MIQNTTENIG QFLYLEGVQY LMYNTYDVHF YSSFALLMLF PKIELSIQRD FAAAVLMHDS SKKQVMSSGE FVTRKVLGAV PHDIGLNDPW
601: FELNAYNLFN TDRWKDLNSK FVLQVYRDVV ATGDLNFAKA VWPSVYTAIA YLDQFDKDGD GMIENEGFPD QTYDAWSCSG VSAYCGGLWV AALQAGSALA
701: REIGDNGAAV YFNAKYEKAR SVYEKLWNGS YFNYDNSRSG SSSSILADQM AGQWYARACG LKPIAKEEWI KKALETVYDF NVMRVRDGTR GAVNGMLPDG
801: RVDTSTMVSR EVWAGTTYSV AACMIQEGLA DKGFRTASGI YEAAWSDRGL GCAFQTPEAW TTNDEYRSLC YMRPLAIWGI QWAHTMPKPN REQEVSLRPQ
901: EEDATSVLFQ QHAGFIKVAH YLKNTKGKDH RNRLQTAYET FLKTIRL

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:A0A178WEQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.