Factsheet for Bra028320.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18110	Canola	cytosol	95.96	98.51
CDY09035	Canola	cytosol, mitochondrion	92.64	98.03
Bra014964.1-P	Field mustard	cytosol, nucleus, peroxisome	90.78	92.6
AT3G24180.1	Thale cress	mitochondrion	88.91	90.32
GSMUA_Achr4P26460_001	Banana	cytosol	23.63	76.51
KRG92211	Soybean	cytosol	74.09	75.03
KRH34577	Soybean	cytosol	73.99	75.0
Solyc09g091850.2.1	Tomato	cytosol	71.61	73.82
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	69.64	73.6
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	45.08	71.43
HORVU1Hr1G049550.3	Barley	mitochondrion	67.77	71.32
OQU75660	Sorghum	mitochondrion	68.39	71.2
TraesCS1A01G183900.2	Wheat	mitochondrion	67.46	71.07
Zm00001d005431_P006	Maize	mitochondrion	67.56	70.79
Os07t0444000-02	Rice	cytosol, golgi	23.94	70.64
TraesCS1D01G192800.1	Wheat	mitochondrion	66.84	70.03
TraesCS1D01G149100.2	Wheat	cytosol	68.81	69.67
KXG38347	Sorghum	cytosol	69.22	68.58
GSMUA_Achr4P30190_001	Banana	cytosol, peroxisome, plastid	65.8	68.5
TraesCS1B01G169600.1	Wheat	cytosol	68.81	68.45
GSMUA_Achr4P26470_001	Banana	cytosol	45.49	68.17
TraesCS1A01G152200.2	Wheat	cytosol	68.91	67.93
Os10t0473400-01	Rice	plastid	68.29	67.66
TraesCS1B01G205400.1	Wheat	mitochondrion	64.97	65.59
TraesCS3D01G524900.1	Wheat	mitochondrion	10.67	64.78
Zm00001d032725_P001	Maize	cytosol	66.32	59.93
Bra000598.1-P	Field mustard	cytosol	47.36	49.78
Bra033199.1-P	Field mustard	cytosol	40.83	46.79
Bra028008.1-P	Field mustard	cytosol	45.39	46.11

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
InterPro:B_Glucosidase_GBA2-typ	EnsemblPlantsGene:Bra028320	EnsemblPlants:Bra028320.1	EnsemblPlants:Bra028320.1-P	InterPro:GH116_N	InterPro:GH116_catalytic
GO:GO:0003674	GO:GO:0003824	GO:GO:0004348	GO:GO:0004553	GO:GO:0005575	GO:GO:0006629
GO:GO:0006680	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	InterPro:IPR012341	UniProt:M4EHQ5	PFAM:PF04685	PFAM:PF12215
PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	SUPFAM:SSF48208	UniParc:UPI00025439B3	SEG:seg

Description

AT3G24180 (E=0.0) | catalytic/ glucosylceramidase

Coordinates

chrA01:-:18566921..18573014

Molecular Weight (calculated)

108827.0 Da

IEP (calculated)

7.124

GRAVY (calculated)

-0.392

Length

965 amino acids

Sequence
(BLAST)

001: MVGPTLFHRR KHSWPPEEFI SKTTLQLLDF DSAAPPSHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKDNCRPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRENV HKKYASVLAP GQHGSLGKSR DKGISSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLVF TWAVSWHLIH FYYIMSRRAD VYQLCILQNS IGGTSHMSGG HVNEPFIGED
301: GVSGVLLHHK TCMGNPPVTF AICACETQNV NVTVLPCFGL SEDSFFTAKD MWETMEKDGK FDQENFNSGP SMPSSPGDTI CAAVSASAWV EAHGKCTVSF
401: ALSWPSPKVK FSKGSTYDRR YTKFYGTSRR AAVDLVHDAL THYKRWEEEI EAWQNPILRD DRLPEWYKFT LFNELYFLVA GGTVWIDSAS LHANGNGQRQ
501: QSDLRNLDGK ANGIDGKEQQ NNLNNGDRNG IESNGLFVDT SKADDEDDVG RFLYLEGVEY VMWNTYDVHF YASYALLMLF PKIELNIQRD FAKAVLSEDT
601: RKVKFLAEGN WGIRKVRGAV PHDLGMHDPW NEMNAYNIHD TSKWKDLNPK FVLQVYRDFA ATGDHQFGID VWPAVRAAME YMEQFDRDND DLIENDGFPD
701: QTYDTWTVHG VSAYCGCLWL AALQAAAAMA LQVGDKFFAE LCKNKFLNAK AALEAKLWNG TYLNYDSGAS SNSKSIQTDQ LAGQWYTASS GLPPVFEEFK
801: IRSTLQKIFD FNVMKTRGGR MGAVNGMHPD GKVDETCMQS REIWTGVTYA AAATMILSGM EEQGFTTAEG IFTAGWSEEG FGYWFQTPEG WTMDGHYRSL
901: IYMRPLAIWG MQWALTLPKA ILDGPKINMV DRVHMSPRSR RFSHNVKVVK HKAKCFGNCT LSCSC

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.