Factsheet for Bra014964.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 2
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77496	Canola	cytosol	99.68	99.68
AT3G24180.1	Thale cress	mitochondrion	92.71	92.32
Bra028320.1-P	Field mustard	cytosol, mitochondrion	92.6	90.78
GSMUA_Achr4P26460_001	Banana	cytosol	24.52	77.85
KRG92211	Soybean	cytosol	76.74	76.18
KRH34577	Soybean	cytosol	76.53	76.05
Solyc09g091850.2.1	Tomato	cytosol	73.68	74.47
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	71.67	74.26
Os07t0444000-02	Rice	cytosol, golgi	25.26	73.09
HORVU1Hr1G049550.3	Barley	mitochondrion	69.34	71.54
OQU75660	Sorghum	mitochondrion	70.08	71.52
Zm00001d005431_P006	Maize	mitochondrion	69.45	71.34
TraesCS1A01G183900.2	Wheat	mitochondrion	69.03	71.29
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	45.56	70.77
TraesCS1D01G149100.2	Wheat	cytosol	70.82	70.3
TraesCS1D01G192800.1	Wheat	mitochondrion	68.18	70.03
KXG38347	Sorghum	cytosol	71.67	69.61
TraesCS1B01G169600.1	Wheat	cytosol	70.93	69.18
GSMUA_Achr4P30190_001	Banana	cytosol, peroxisome, plastid	67.65	69.04
Os10t0473400-01	Rice	plastid	70.82	68.79
TraesCS1A01G152200.2	Wheat	cytosol	70.93	68.54
GSMUA_Achr4P26470_001	Banana	cytosol	46.51	68.32
TraesCS1B01G205400.1	Wheat	mitochondrion	66.6	65.9
TraesCS3D01G524900.1	Wheat	mitochondrion	10.99	65.41
Zm00001d032725_P001	Maize	cytosol	68.71	60.86
Bra000598.1-P	Field mustard	cytosol	47.99	49.46
Bra033199.1-P	Field mustard	cytosol	42.18	47.39
Bra028008.1-P	Field mustard	cytosol	46.62	46.42

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
InterPro:B_Glucosidase_GBA2-typ	EnsemblPlantsGene:Bra014964	EnsemblPlants:Bra014964.1	EnsemblPlants:Bra014964.1-P	InterPro:GH116_N	InterPro:GH116_catalytic
GO:GO:0003674	GO:GO:0003824	GO:GO:0004348	GO:GO:0004553	GO:GO:0005575	GO:GO:0006629
GO:GO:0006680	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	InterPro:IPR012341	UniProt:M4DEP2	PFAM:PF04685	PFAM:PF12215
PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	SUPFAM:SSF48208	UniParc:UPI0002540DFD	SEG:seg

Description

AT3G24180 (E=0.0) | catalytic/ glucosylceramidase

Coordinates

chrA07:-:4812378..4818000

Molecular Weight (calculated)

105692.0 Da

IEP (calculated)

6.661

GRAVY (calculated)

-0.411

Length

946 amino acids

Sequence
(BLAST)

001: MVGPSTLFHR RKHSWPPEEF ITKTTLQLLD FDSAAPPPHA WRRRLNCHAN ILKEFTITFR EAIKMVRLGI RLWSYVREEA SHGRKAPIDP FTKENCKPSA
101: SQGVPLGGMG SGSISRGFRG EFKQWQITPG TCDPSPMMSN QFSIFISREG GHKKYASVLA PGQHGSLGKT RDKGISSWGW NLNGQHSTYH ALFPRAWTVY
201: DGEPDPELKI SCRQISPFIP NNYRDSSLPA AVFVYTLVNT GKERAKVSLL FTWANSIGGT SHMLGGHVNE PFVGEDGVSG VLLHHKTGKG NPPVTFAISA
301: CETQNVNVTV LPCFGLSEDS SFTAKDMWDK MEKDGKFDQE NFNSGPSVPS TAGDTICAAV SATAWVEAHG KCTVSFALSW SSPKVKFSKG STYDRRYTKF
401: YGTSPRAAVD LVHDALTHYK RWEEDIEAWQ NPILRDERLP EWYKFTLFNE LYFLVAGGTV WIDSASVRAN GNSQLQQSDL GNSDGGVDSK DQQNNRDNCD
501: SNGIESNGEA SVTDQSNGLF VDTSHVDDDV GRFLYLEGVE YVMWNTYDVH FYASYALLML FPKIELNIQR DFAKAVLSED GRKVKFLAEG NLGIRKVRGA
601: VPHDLGMHDP WNEMNAYNIH DTSKWKDLNP KFVLQVYRDF AATGDYQFGI DVWPAVRAAM EYMEQFDRDN DDLIENDGFP DQTYDTWTVH GVSAYCGCLW
701: LAALQAAAAM ALQIGDKFFA ELCKNKFLNA KAALEAKLWN GTYFNYDSGA SSNSKSIQTD QLAGQWYTAS SGLPPIFEDS KIKSTLQKIF DFNVMKTKGG
801: RMGAVNGMHP DGKVDETCMQ SREIWTGVTY AAAATMILSG MEEQGFTTAE GIFTAGWSEE GFGYWFQTPE GWTMDGHYRS LIYMRPLAIW GMQWALSLPK
901: AILDAPKINM MDRVHMSPRS RRFSHNSRVV THKAKCFGDS SLSCSC

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.