Factsheet for Os10t0473400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38347	Sorghum	cytosol	90.76	90.76
TraesCS1D01G149100.2	Wheat	cytosol	88.6	90.56
TraesCS1B01G169600.1	Wheat	cytosol	89.63	90.0
TraesCS1A01G152200.2	Wheat	cytosol	89.32	88.87
GSMUA_Achr4P26460_001	Banana	cytosol	25.56	83.56
Zm00001d032725_P001	Maize	cytosol	86.65	79.03
Os07t0444000-02	Rice	cytosol, golgi	25.56	76.15
GSMUA_Achr4P26470_001	Banana	cytosol	50.0	75.62
GSMUA_Achr4P30190_001	Banana	cytosol, peroxisome, plastid	71.36	74.97
Solyc09g091850.2.1	Tomato	cytosol	70.64	73.5
CDY09035	Canola	cytosol, mitochondrion	67.66	72.26
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	67.66	72.18
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	44.97	71.92
CDX85114	Canola	cytosol, mitochondrion, nucleus	68.89	70.93
CDX77496	Canola	cytosol	68.79	70.82
Bra014964.1-P	Field mustard	cytosol, nucleus, peroxisome	68.79	70.82
AT3G24180.1	Thale cress	mitochondrion	68.99	70.74
CDY18110	Canola	cytosol	67.56	70.0
Bra028320.1-P	Field mustard	cytosol, mitochondrion	67.66	68.29
Os11t0242100-01	Rice	cytosol, plasma membrane	48.77	50.0
Os08t0111200-01	Rice	plasma membrane	44.97	47.2

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	EntrezGene:4348876	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	ProteinID:AAP54244.2
EMBL:AK067795	ProteinID:BAF26747.1	ProteinID:BAT11271.1	ProteinID:BAT11272.1	InterPro:B_Glucosidase_GBA2-typ	InterPro:GH116_N
InterPro:GH116_catalytic	GO:GO:0003674	GO:GO:0003824	GO:GO:0004348	GO:GO:0004553	GO:GO:0005575
GO:GO:0006629	GO:GO:0006680	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:Os10g0473400	EnsemblPlants:Os10t0473400-01	PFAM:PF04685
PFAM:PF12215	PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	UniProt:Q7XDG7	SUPFAM:SSF48208
UniParc:UPI0000DB3F17	RefSeq:XP_015614460.1	SEG:seg	:	:	:

Description

Beta-glucosidase, GBA2 type domain containing protein. (Os10t0473400-01);Similar to predicted protein. (Os10t0473400-02);Similar to catalytic. (Os10t0473400-03)

Coordinates

chr10:-:17584547..17592697

Molecular Weight (calculated)

109274.0 Da

IEP (calculated)

7.231

GRAVY (calculated)

-0.449

Length

974 amino acids

Sequence
(BLAST)

001: MVSGNLFHCR RNSWPAEEYV GRTALQLLDF DGGSPPEQAW RRRLNSHANL LKEFSVTFME AMRMMSLGLR LWSYVREEAS HGRKAPIDPF TKEKCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKNWHIIPGL CETSPVMENQ FSIFVSRDGG NKKYSSVLSP GHHEGLKKCN DSGISSWDWN LSGQHSTYHA LFPRAWTVYD
201: GEPDPDLKIS CRQISPFIPH DYKDSSLPTS VFVYTLVNTG KDRAKVSLLM TWANSIGGFS HHSGGHFNEP FIAEDGVSGV LLHHKTAKDN PPVTFAIAAC
301: ETQNVNVTVL PVFGLSGEGH DSAKQMWDRM KQNGHFDREN FEAGTSMPSS SGETLCAAVS ASTWVEPHGR CTVVFGLAWS SPKIKFQKGC TYNRRYTEFY
401: GTSERSAVNL VHDALTKYRI WEEEIEKWQN PILKNEKLPE WYKFTLFNEL YFLVAGGTVW TDGQPPVIDE KPSPGSNQQK SSKRGTRDTK QESVKDNHVK
501: LTAEQVTNGG DLANGEEQSV SKYAAVHGPQ MAKATNGLGS QEPIPYLLSK NGPENVGKFL YLEGVEYIMW CTYDVHFYAS FALLDLFPKI ELSIQRDFAN
601: AVLYEDRRRM KFLADGTSGI RKVKGAVPHD LGTHDPWHEM NAYNIHDTSK WKDLNPKFVL QVYRDFAATG DMSFGRDVWP AVCAVMDYMN QFDRDGDGLI
701: ENDGFPDQTY DAWTVHGISA YCGGLWLAAL QAAATMAHRL GDRPFAEKYK LKFIQAKAVY EAKLWNGSYF NYDSGTSSNS RSIQADQLAG QWYAASSGLP
801: PLFDENKIRS ALQKIFEFNV MKVKGGRLGA VNGMTPNGKV DETCMQSREI WTGVTYGVAA NMLLHGMEHQ GFTTAEGIFI AGWSEEGYGY WFQTPEGWTI
901: DGHYRSLIYM RPLAIWAMQW ARSPPKAILD APKVNLMDRI HLSPQMIRAM NEINVRKIAP DNRCFPSSAF RCEC

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.