Factsheet for GSMUA_Achr4P30190_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26460_001	Banana	cytosol	28.48	88.59
GSMUA_Achr4P26470_001	Banana	cytosol	50.27	72.36
TraesCS1D01G149100.2	Wheat	cytosol	73.89	71.88
KXG38347	Sorghum	cytosol	75.08	71.46
Os10t0473400-01	Rice	plastid	74.97	71.36
TraesCS1B01G169600.1	Wheat	cytosol	73.79	70.52
TraesCS1A01G152200.2	Wheat	cytosol	73.57	69.66
Solyc09g091850.2.1	Tomato	cytosol	70.33	69.66
CDY09035	Canola	cytosol, mitochondrion	68.07	69.19
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	66.88	67.91
Bra014964.1-P	Field mustard	cytosol, nucleus, peroxisome	69.04	67.65
CDX77496	Canola	cytosol	69.04	67.65
CDY18110	Canola	cytosol	68.5	67.55
CDX85114	Canola	cytosol, mitochondrion, nucleus	68.93	67.55
AT3G24180.1	Thale cress	mitochondrion	68.82	67.16
Bra028320.1-P	Field mustard	cytosol, mitochondrion	68.5	65.8
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	41.53	63.22
Zm00001d032725_P001	Maize	cytosol	71.74	62.27
GSMUA_Achr6P28950_001	Banana	extracellular	21.9	53.28
GSMUA_Achr6P18500_001	Banana	cytosol	46.49	51.62
GSMUA_Achr6P28940_001	Banana	cytosol	23.09	49.77
GSMUA_Achr9P08230_001	Banana	vacuole	31.61	45.15

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
InterPro:B_Glucosidase_GBA2-typ	InterPro:GH116_N	InterPro:GH116_catalytic	GO:GO:0003674	GO:GO:0003824	GO:GO:0004348
GO:GO:0004553	GO:GO:0005575	GO:GO:0006629	GO:GO:0006680	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr4G30190_001
EnsemblPlants:GSMUA_Achr4P30190_001	EnsemblPlants:GSMUA_Achr4T30190_001	InterPro:IPR012341	UniProt:M0STD1	PFAM:PF04685	PFAM:PF12215
PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	SUPFAM:SSF48208	UniParc:UPI00029592FC	SEG:seg

Description

Putative Non-lysosomal glucosylceramidase [Source:GMGC_GENE;Acc:GSMUA_Achr4G30190_001]

Coordinates

chr4:+:27884366..27894022

Molecular Weight (calculated)

103995.0 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.232

Length

927 amino acids

Sequence
(BLAST)

001: MVTGHLLHHK KSSWPADEYV SQATLLLLDF DGGAPPEHAW RRRLNSHANI LKEFSVTFME AFRMLRLGLR LWSYVREEAS QGRKAPIDPF TKEQCKPTAS
101: QGVPLGGMGS GSISRGFRGE FKHWQIIPGS CETSPVMANQ FSIFISRDGG EKKYSSVLAP GHHEGLKKNG DLGISSWDWN LSGQHSTYHA LFPRAWTVYD
201: GEPDPDLKIS CRQISPFIPH DYHESSLPTA VFVYTLVNTG KERAKVSLLM TWANSIGGVS HHTGGHINEP FIDDDGVSGV LLHHKQDNPP VTFAIAACES
301: QNVTVTVLPS FGLCGENYVT ARDMWGTMVQ DGQFQRENFG AGPCVPSSVG DTLCAAVSAS TWVEPHGRCT AVFALAWSSP KVKFQKGCTY HRIFVYSFLF
401: SYRRYTKFYG ASERSAINLV HDALKKYKLW EEEIEKWQNP ILQNAKLPDW YKFTLFNELY FLVAGGTVWT GTFVCFLFLF RACHGWLQAS NTLINADGEA
501: PIIEENLSAA SDCHESTKKL ADNDDVCVPD SAQTGNVLHQ QHNPENVGRF LYLEGVEYIM WCTYDVHFYA SFALLDLFPK IELTIQHDFA RAMNAYNIHD
601: TSKWKDLNPK FVLQVYRDFA ATGDMSFGRD VWPAVCAAMD YMEQFDRDGD GLIENDGFPD QTYDAWTVHG ISAYCGCLWL AALQAAAAMA EHLGDWAFAE
701: KCKIKFLKAK PVFEAKLWNG SYFNYDSGNS SNSCSIQADQ LAGQWYTASS QLPPLFDEIK IRNTLQTIFE FNVMKVSGGR MGAVNGMNPN GKVDECCMQS
801: REIWTGVTYS LAATMLLHGM DHEAFTTAEG IFTGGWSEEG FGYWFQTPEG WTIDGRYRSL IYMRPLAIWA MQWALSPPKT ILEAPKVNMM DKLLTSTLNM
901: TTLNDTDIQK IAPKIGRFGN AVFHCEC

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.