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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • peroxisome 1
  • mitochondrion 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os10t0473400-01 Rice plastid 90.76 90.76
TraesCS1D01G149100.2 Wheat cytosol 87.99 89.93
TraesCS1B01G169600.1 Wheat cytosol 89.01 89.38
TraesCS1A01G152200.2 Wheat cytosol 88.6 88.15
Zm00001d032725_P001 Maize cytosol 94.15 85.86
GSMUA_Achr4P26460_001 Banana cytosol 25.87 84.56
GSMUA_Achr4P26470_001 Banana cytosol 50.21 75.93
OQU75660 Sorghum mitochondrion 71.66 75.3
GSMUA_Achr4P30190_001 Banana cytosol, peroxisome, plastid 71.46 75.08
Solyc09g091850.2.1 Tomato cytosol 70.74 73.61
CDY09035 Canola cytosol, mitochondrion 68.58 73.25
VIT_05s0051g00910.t01 Wine grape cytosol, nucleus, vacuole 67.66 72.18
CDX85114 Canola cytosol, mitochondrion, nucleus 69.71 71.78
Bra014964.1-P Field mustard cytosol, nucleus, peroxisome 69.61 71.67
CDX77496 Canola cytosol 69.51 71.56
PGSC0003DMT400076302 Potato cytosol, nucleus, peroxisome, plastid 44.66 71.43
CDY18110 Canola cytosol 68.38 70.85
AT3G24180.1 Thale cress mitochondrion 69.1 70.84
Bra028320.1-P Field mustard cytosol, mitochondrion 68.58 69.22
KXG28122 Sorghum cytosol 47.54 48.48
KXG24230 Sorghum cytosol 46.0 47.26
Protein Annotations
KEGG:00511+3.2.1.45KEGG:00600+3.2.1.45MapMan:50.3.2InterPro:6-hairpin_glycosidase_sfUniProt:A0A1B6QKA4InterPro:B_Glucosidase_GBA2-typ
InterPro:GH116_NInterPro:GH116_catalyticGO:GO:0003674GO:GO:0003824GO:GO:0004348GO:GO:0004553
GO:GO:0005575GO:GO:0006629GO:GO:0006680GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016020GO:GO:0016787GO:GO:0016798EnsemblPlants:KXG38347ProteinID:KXG38347
ProteinID:KXG38347.1ProteinID:KXG38348.1PFAM:PF04685PFAM:PF12215PIRSF:PIRSF028944PANTHER:PTHR12654
PANTHER:PTHR12654:SF3EnsemblPlantsGene:SORBI_3001G221800SUPFAM:SSF48208UniParc:UPI0002207088SEG:seg:
Description
hypothetical protein
Coordinates
chr1:+:21002044..21010739
Molecular Weight (calculated)
109314.0 Da
IEP (calculated)
7.242
GRAVY (calculated)
-0.435
Length
974 amino acids
Sequence
(BLAST)
001: MVSGHIFHCR KNSWPAEEYV GRTALQLLDF DGGAPPEQAW RRRLNSHANI LKEFSVTFME AMRMMSLGLR LWSYVREEAS HGRKAPIDPF TKERCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKNWHIIPGL CESSPVMENQ FSIFVSRDGG NKKYSSVLAP GHHEGLKKNS DSGISSWDWN LSGQHSTYHA LFPRAWTVYD
201: GEPDPDLKIS CRQISPFIPH DYKDSSLPTS VFVYTLVNTG RDRAKVSLLM TWANSIGGFS HNSGGHYNEP FIAEDGVSGV LLHHKTAKDN PPVTFAVAAC
301: ETQNVNVTVL PVFGLSGENH VSAKEMWNTM QQNGHFDREN FSAGSSMPSS PGQKLCAAVS ASTWVEPHGR CTVVFALAWS SPKVKFQKGC TYNRRYTQFY
401: GTSEKSAVNL VHDALTKYKL WEEEIEKWQN PILKDERLPE WYKFTLFNEL YFLVAGGTVW TDGQPPAIDE KNSPGSIQQK SSKRGTKDTK QGSVKDNHVN
501: LTVEQVPHGG QMTNSDDHSV SKFAAVHGSQ MQEQVNGLKS EEPIPYLISK DGPEHVGKFL YLEGVEYIMW NTYDVHFYAS FALLDLFPKI ELSIQRDFAN
601: AVLYEDRRKV KFLADGTSGI RKVKGAVPHD LGTHDPWHEM NAYNIHDTSK WKDLNPKFVL QIYRDFAATG DMQFGRDVWP AVCAAMDYMD QFDRDGDGLI
701: ENDGFPDQTY DAWTVHGISA YCGCLWLAAL QAAATMAHRL GDRHFAEKYK LKFIKAKAVY EAKLWNGSYF NYDSGTSSNS RSIQADQLAG QWYTASSGLP
801: PLFDEHKIRT ALQKIFEFNV MKVKGGRMGA VNGMTPKGKV DETCMQSREI WTGVTYAVAA NMLLHGMEHQ GFTTAEGIFI AGWSEEGYGY WFQTPEGWTT
901: DGHYRSLVYM RPLAIWAIQY AVSPPKAILE APKVNLMDRI HISPHMARAI SEISIRKIAP DNRCFPSSAF HCEC
Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)
001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC
Arabidopsis Description
Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.