CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09035	Canola	cytosol, mitochondrion	95.11	98.03
Bra028320.1-P	Field mustard	cytosol, mitochondrion	98.51	95.96
CDX77496	Canola	cytosol	93.3	92.71
CDX85114	Canola	cytosol, mitochondrion, nucleus	93.3	92.71
AT3G24180.1	Thale cress	mitochondrion	91.38	90.42
GSMUA_Achr4P26460_001	Banana	cytosol	24.36	76.85
KRG92211	Soybean	cytosol	75.96	74.92
KRH34577	Soybean	cytosol	75.85	74.89
Solyc09g091850.2.1	Tomato	cytosol	73.51	73.82
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	71.38	73.49
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	46.06	71.1
OQU75660	Sorghum	mitochondrion	70.0	70.98
HORVU1Hr1G049550.3	Barley	mitochondrion	69.15	70.88
TraesCS1A01G183900.2	Wheat	mitochondrion	68.94	70.74
Os07t0444000-02	Rice	cytosol, golgi	24.57	70.64
Zm00001d005431_P006	Maize	mitochondrion	69.04	70.47
TraesCS1D01G192800.1	Wheat	mitochondrion	68.3	69.71
TraesCS1D01G149100.2	Wheat	cytosol	70.53	69.57
GSMUA_Achr4P30190_001	Banana	cytosol, peroxisome, plastid	67.55	68.5
KXG38347	Sorghum	cytosol	70.85	68.38
TraesCS1B01G169600.1	Wheat	cytosol	70.53	68.35
GSMUA_Achr4P26470_001	Banana	cytosol	46.6	68.01
TraesCS1A01G152200.2	Wheat	cytosol	70.64	67.82
Os10t0473400-01	Rice	plastid	70.0	67.56
TraesCS1B01G205400.1	Wheat	mitochondrion	66.38	65.27
TraesCS3D01G524900.1	Wheat	mitochondrion	10.96	64.78
Zm00001d032725_P001	Maize	cytosol	67.77	59.64
CDX83178	Canola	cytosol	50.64	49.95
CDY21445	Canola	cytosol	49.79	49.06
CDY41128	Canola	cytosol	41.91	46.79
CDX94275	Canola	cytosol	41.7	46.56
CDX93755	Canola	cytosol	46.91	46.42
CDY15283	Canola	cytosol	46.38	45.89

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
GO:A0A078FUF3	UniProt:A0A078FUF3	InterPro:B_Glucosidase_GBA2-typ	EnsemblPlants:CDY18110	ProteinID:CDY18110	ProteinID:CDY18110.1
InterPro:GH116_N	InterPro:GH116_catalytic	GO:GO:0003674	GO:GO:0003824	GO:GO:0004348	GO:GO:0004553
GO:GO:0005575	GO:GO:0006629	GO:GO:0006680	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00002614001	InterPro:IPR012341
PFAM:PF04685	PFAM:PF12215	PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	SUPFAM:SSF48208
UniParc:UPI0004EEA393	SEG:seg	:	:	:	:

Description

BnaA01g23710DNon-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:A0A078FUF3]

Coordinates

chrLK032082:-:535844..542016

Molecular Weight (calculated)

105546.0 Da

IEP (calculated)

6.947

GRAVY (calculated)

-0.426

Length

940 amino acids

Sequence
(BLAST)

001: MVGPTLFHRR KHSWPPEEFI SKATLQLLDF DSAAPPSHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKDNCRPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRENV HKKYASVLAP GQHGSLGKSR DKGISSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLVF TWANSIGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAISAC
301: ETQNVNVTVL PCFGLSEDSY FTAKDMWETM EKDGNFDQEN FNSGPSMPSS PGDTICAAVS ASAWVEAHGK CTVSFALSWP SPKVKFSKGS TYDRRYTKFY
401: GTSRRAAVDL VHDALTHYKR WEDDIEAWQN PILRDDMLPE WYKFTLFNEL YFLVAGGTVW IDSASLHANG NGQRQQSDLR NSDGKASGID SKEQQNNLNN
501: GDRNGIESNG LFVDTSQADD EDDVGRFLYL EGVEYVMWNT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDTRKVKF LAEGNWGIRK VRGAVPHDLG
601: MHDPWNEMNA YNIHDTSKWK DLNPKFVLQV YRDFAATGDH QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC GCLWLAALQA
701: AAAMALQVGD KFFAELCKNK FLNAKAALEA KLWNGTYLNY DSGASSNSKS IQTDQLAGQW YTASSGLPPV FEEFKIRSTL QKIFDFNVMK TRGGRMGAVN
801: GMHPDGKVDE TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL TLPKAILDGP
901: KINMVDRVHM SPRSRRFSHN VKVVKHKAKC FGNCKLSCSC

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.