Factsheet for GSMUA_Achr4P26460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P28940_001	Banana	cytosol	43.96	30.47
GSMUA_Achr4P30190_001	Banana	cytosol, peroxisome, plastid	88.59	28.48
TraesCS1D01G149100.2	Wheat	cytosol	84.23	26.34
TraesCS1B01G169600.1	Wheat	cytosol	84.23	25.88
KXG38347	Sorghum	cytosol	84.56	25.87
Os10t0473400-01	Rice	plastid	83.56	25.56
Solyc09g091850.2.1	Tomato	cytosol	80.2	25.53
TraesCS1A01G152200.2	Wheat	cytosol	83.56	25.43
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	76.85	25.08
CDY09035	Canola	cytosol, mitochondrion	76.51	25.0
CDX85114	Canola	cytosol, mitochondrion, nucleus	77.85	24.52
CDX77496	Canola	cytosol	77.85	24.52
Bra014964.1-P	Field mustard	cytosol, nucleus, peroxisome	77.85	24.52
AT3G24180.1	Thale cress	mitochondrion	77.85	24.42
CDY18110	Canola	cytosol	76.85	24.36
Bra028320.1-P	Field mustard	cytosol, mitochondrion	76.51	23.63
Zm00001d032725_P001	Maize	cytosol	73.83	20.6
GSMUA_Achr6P18500_001	Banana	cytosol	43.96	15.69
GSMUA_Achr9P08230_001	Banana	vacuole	2.35	1.08
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	0.67	0.33
GSMUA_Achr4P26470_001	Banana	cytosol	0.67	0.31
GSMUA_Achr6P28950_001	Banana	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr4P26460_001	EnsemblPlants:GSMUA_Achr4T26460_001	EnsemblPlantsGene:GSMUA_Achr4G26460_001	InterPro:GH116_N	KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45
PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	PFAM:PF12215	SEG:seg	UniParc:UPI0002962363	UniProt:M0SSA8
MapMan:50.3.2	:	:	:	:	:

Description

Putative Non-lysosomal glucosylceramidase [Source:GMGC_GENE;Acc:GSMUA_Achr4G26460_001]

Coordinates

chr4:+:25758595..25762754

Molecular Weight (calculated)

33330.6 Da

IEP (calculated)

9.392

GRAVY (calculated)

-0.388

Length

298 amino acids

Sequence
(BLAST)

001: MVSGHLFHCR KSSWPAEEYV NRATLQLLDF DGGAPPDHAW RRRLNSHANR LKEFSVTFME AIRMMRLGVR LWSYVREEAS HGRKAPIDPF TREQCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKHWQIIPGS CETSPVMANQ FSIFISRDGG NKKYSSVLAP GQHEGLQKKG DLGISSWDWN LTGQHSTYHA LFPRAWTVYD
201: GEPDPDLKIS CRQISPFIPH DYRESSLPTA VFVYTLVNTG RERAKVSLLM TWANSIGGVS HHSGGHINEP FIGDDGVSGV LLHHKQVFNL RVLFFPVG

Best Arabidopsis Sequence Match ( AT3G24180.2 )
(BLAST)

001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8VZ08]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.