Factsheet for GSMUA_Achr6P28950_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
peroxisome 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P08230_001	Banana	vacuole	91.6	53.77
PGSC0003DMT400064004	Potato	cytosol, nucleus, plastid	69.55	43.3
GSMUA_Achr6P18500_001	Banana	cytosol	72.18	32.93
GSMUA_Achr4P26470_001	Banana	cytosol	54.86	32.45
KXG28122	Sorghum	cytosol	76.12	30.37
TraesCS4A01G226400.1	Wheat	cytosol	75.59	30.22
TraesCS4D01G087100.5	Wheat	cytosol	75.59	30.22
Os11t0242100-01	Rice	cytosol, plasma membrane	75.07	30.11
TraesCS4B01G088800.4	Wheat	cytosol	75.85	29.89
Zm00001d048988_P012	Maize	cytosol	73.75	29.42
VIT_12s0035g01220.t01	Wine grape	cytosol	72.7	29.19
Bra000598.1-P	Field mustard	cytosol	70.08	29.09
VIT_18s0001g05700.t01	Wine grape	nucleus	72.18	28.86
CDX83178	Canola	cytosol	70.34	28.12
HORVU4Hr1G015450.2	Barley	mitochondrion	74.8	28.0
Solyc01g103230.2.1	Tomato	cytosol	70.08	27.99
CDY21445	Canola	cytosol	69.82	27.88
KRH51297	Soybean	cytosol	67.72	27.71
AT5G49900.3	Thale cress	cytosol	69.29	27.59
PGSC0003DMT400002617	Potato	cytosol	66.67	26.82
Solyc11g042460.1.1	Tomato	cytosol	66.67	26.74
CDX93755	Canola	cytosol	65.62	26.32
CDY15283	Canola	cytosol	65.35	26.21
Bra028008.1-P	Field mustard	cytosol	65.35	26.21
AT4G10060.2	Thale cress	nucleus	62.73	25.92
CDY41128	Canola	cytosol	57.22	25.89
Bra033199.1-P	Field mustard	cytosol	57.22	25.89
AT1G33700.2	Thale cress	cytosol	64.04	25.77
CDX94275	Canola	cytosol	56.43	25.53
GSMUA_Achr4P30190_001	Banana	cytosol, peroxisome, plastid	53.28	21.9
GSMUA_Achr6P28940_001	Banana	cytosol	1.84	1.63
PGSC0003DMT400063999	Potato	cytosol	0.0	0.0
GSMUA_Achr4P26460_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr6P28950_001	EnsemblPlants:GSMUA_Achr6T28950_001	EnsemblPlantsGene:GSMUA_Achr6G28950_001	Gene3D:1.50.10.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0016787	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	InterPro:GH116_catalytic	InterPro:IPR012341
KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	PANTHER:PTHR12654	PANTHER:PTHR12654:SF16	PFAM:PF04685	SUPFAM:SSF48208
UniParc:UPI0002960F20	UniProt:M0TB40	MapMan:50.3.2	:	:	:

Description

Putative Non-lysosomal glucosylceramidase [Source:GMGC_GENE;Acc:GSMUA_Achr6G28950_001]

Coordinates

chr6:+:29212571..29216340

Molecular Weight (calculated)

43368.3 Da

IEP (calculated)

6.271

GRAVY (calculated)

-0.393

Length

381 amino acids

Sequence
(BLAST)

001: MWNTYDVHFY SSYSLIMLFP KLELSIQRDF AAAVMMHDPE KVNAYNLHNT DRWKDLNPKF VLQAWRDTVA TGDKRFAKAV WPSVYMAIAY MDQFDKDKDG
101: MIENEGFPDQ TYDVWSVTGV SSYSGGLWVA ALQAASAMAR EVGDRASEEL FWDKYLKAKS VYHKLWNGSY FNYDNSGSKT SSSIQADQLA GHWYARACGL
201: MSIVDKEKAK STFQKIFSFN VLKFKDGKRG AVNGMRPDGT IDKSTMQSRE IWPGVTYSVA AAMIQEGMLE EAFRTAQGIY EAAWSQEGLG YSFQTPEAWN
301: NEDQYRSLCY MRPLAIWAMQ WALSLPPNVC KEPETVLDGE ADSKHTVAFS RVAKLLKLPE EETSKSILRV IYEITCGRLR S

Best Arabidopsis Sequence Match ( AT5G49900.2 )
(BLAST)

001: MNDGVQGVLL HHKTANGLPS LSYAISAQAT DGVSVSACPF FIVSGKQDGI TAKDMWQAVK ENGSFDHLKA SEASMQSDHG SSIGAAVAAS VTVLPGESRI
101: VTFSLAWDCP EVQFPSGKIY SRRYTKFYGN NGDAAAQIAH DAILGHSQWE SWIEDWQRPI LEDKRLPAWY PVTLFNELYY LNSGGTLWTD GSSPVHSLAG
201: VREKKFSLDK SQLGLKNDID VPHQNDTAVS VLEKMASTLE ELHASTTSNS AFGTKLLEEG EENIGHFLYL EGIEYRMWNT YDVHFYASFA LVMLFPKLEL
301: SIQRDFAAAV MLHDPTKVKT LSEGQWVQRK VLGAVPHDLG INDPWFEVNG YTLHNTDRWK DLNPKFVLQV YRDVVATGDK KFASAVWPSV YVAMAYMAQF
401: DKDGDGMIEN EGFPDQTYDT WSASGVSAYC GGLWVAALQA ASALARVVGD KNSQDYFWSK FQKAKVVYEK KLWNGSYFNY DNSGSQYSST IQADQLAGQW
501: YARASGLLPI VDEDKARTAL EKVYNYNVMK IKDGKRGAVN GMHPNGKVDT ASMQSREIWS GVTYALSATM IQEGLVEMAF QTASGIYEAA WSETGLGYSF
601: QTPESWNTVD EYRSLTYMRP LAIWAMQWAL TKTSQKQEQL GLEPEQQEPE LEPSSSMKHD IGFSRVSRLL SLPNEASAKS TLQTLFDYTC RRMMS

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8GUI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.