Factsheet for VIT_18s0001g05700.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P28950_001	Banana	extracellular	28.86	72.18
VIT_12s0035g01220.t01	Wine grape	cytosol	70.83	71.13
GSMUA_Achr9P08230_001	Banana	vacuole	46.38	68.1
GSMUA_Achr6P28940_001	Banana	cytosol	30.64	67.91
PGSC0003DMT400002617	Potato	cytosol	66.74	67.16
Solyc11g042460.1.1	Tomato	cytosol	66.11	66.32
Zm00001d048988_P012	Maize	cytosol	63.38	63.25
Os11t0242100-01	Rice	cytosol, plasma membrane	62.96	63.16
KXG28122	Sorghum	cytosol	63.27	63.14
TraesCS4D01G087100.5	Wheat	cytosol	62.54	62.54
TraesCS4A01G226400.1	Wheat	cytosol	62.54	62.54
Bra028008.1-P	Field mustard	cytosol	62.12	62.32
CDX93755	Canola	cytosol	62.01	62.21
CDY41128	Canola	cytosol	54.88	62.11
Bra033199.1-P	Field mustard	cytosol	54.88	62.11
CDY15283	Canola	cytosol	61.8	62.0
CDX94275	Canola	cytosol	54.35	61.52
TraesCS4B01G088800.4	Wheat	cytosol	62.12	61.22
AT1G33700.2	Thale cress	cytosol	60.65	61.03
AT4G10060.2	Thale cress	nucleus	58.66	60.63
HORVU4Hr1G015450.2	Barley	mitochondrion	62.12	58.15
VIT_05s0051g00910.t01	Wine grape	cytosol, nucleus, vacuole	46.07	48.08

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	EntrezGene:100246502	wikigene:100246502	MapMan:50.3.2
InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf	EMBL:AM473355	InterPro:B_Glucosidase_GBA2-typ	ProteinID:CAN61859	ProteinID:CAN61859.1
ProteinID:CBI31319	ProteinID:CBI31319.3	UniProt:D7TLE7	EMBL:FN595996	InterPro:GH116_N	InterPro:GH116_catalytic
GO:GO:0003674	GO:GO:0003824	GO:GO:0004348	GO:GO:0004553	GO:GO:0005575	GO:GO:0006629
GO:GO:0006680	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	InterPro:IPR012341	EntrezGene:LOC100246502	wikigene:LOC100246502	PFAM:PF04685
PFAM:PF12215	PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF16	SUPFAM:SSF48208	TIGR:TC66922
UniParc:UPI0001BE39CB	ArrayExpress:VIT_18s0001g05700	EnsemblPlantsGene:VIT_18s0001g05700	EnsemblPlants:VIT_18s0001g05700.t01	unigene:Vvi.11690	RefSeq:XP_002275782
RefSeq:XP_002275782.1	RefSeq:XP_010645881.1	RefSeq:XP_010645882.1	RefSeq:XP_010645883.1	SEG:seg	:

Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:D7TLE7]

Coordinates

chr18_random:-:4445293..4458186

Molecular Weight (calculated)

106791.0 Da

IEP (calculated)

6.199

GRAVY (calculated)

-0.332

Length

953 amino acids

Sequence
(BLAST)

001: MENGHKEDGD MEHPVKSSAH KVNPGKPASL TWQRKLNTKA NTLTRFNLKL REIKHLAPLG VRLWHHVNAE AAKGRISIID PFSKRLVTSY HGVPLGGIGG
101: GSIGRSYRGE FQRYQLFPRI CEDSPVLANQ FSVFVSRPNG KKSSTVLCPR NPEVLKGSAS SGIGSWDWNL DGESCTYHAL YPRAWTVYEG EPDPEISIIS
201: SQISPFIPHN YKESSFPVSV FKFTLSNSGK TSADITLLFT WANSVGGTSE FSGHHYNSKM KTKDGVHGVL LHHKTANGHP PVTFAIAAEE TGDVHISECP
301: CFLISGNSLG VTAKEMWQEI KQHGSFDHLD FDGSSMRSEP GSSIGAAVAA SLTLPPDTVR TVTFSLAWAC PEVRFTSGKT YHRRYTRFYG THVDAAEEIA
401: HDAILEHANW VSEIEAWQGP ILEDRRLPEW YRITLFNELY FLNAGGTIWT DGLPPMQSLA TIEQIKFSLD RSISDPKNTT DIVHQNDSTV EILGRMTSML
501: EQIHNPTTSN SAFGTYLLQS GEENVGQFLY LEGIEYHMWN TYDVHFYSSF AIIMLFPQLE LSIQRDFAAA VMVHDPSRMK IMSDGKWVPR KVLGAVPHDI
601: GISDPWFELN AYNLYDTDRW KDLNSKFVLQ VYRDMVATGD KNFARAVWPA VYIAIAFLDQ FDKDGDGMIE NDGFPDQTYD AWSVTGVSAY CGGLWVAALQ
701: AASAMAREVG DSMTADYFWF KFQKAKAVYD KLWNGSYFNY DNSGGSSSSS IQADQLAGQW YARACGLQPI VDDEKARSAL EKVYNFNVLK VKEGKCGAVN
801: GMLPDGRVDM SAMQSREIWA GVTYSVAANM IHEGMVETAF NTASGIYDAA WSQEGLGYSF QTPEAWNTDE EYRSLCYMRP LAIWAMQWAL SKPELHNHDM
901: KHEEGKGTLN FEHHVGFEKV AHLLKLPEEE ASKSFLQLFF DLTCRRLYTL RLN

Best Arabidopsis Sequence Match ( AT5G49900.1 )
(BLAST)

001: MFEEKIMDIG EDVKPLNSSD TKVDPAVPAS LTWQRKIDSD VKAPREFNLS VKEIFQLAPV GIRLWFLCRE EAAKGRLAFI DPFSKHSVTS SHGVPLGGIG
101: AGSIGRSFKG EFQRWQLFPP KCEDEPVLAN QFSAFVSRAN GKKYSSVLCP RNPKLDKQDS ESGIGSWDWN LKGDKSTYHA LYPRSWTMYE GEPDPELRIV
201: CRQVSPFIPH NYKESSFPVS VFTFTLHNLG NTTADVTLLF TWANSVGGDS EFSGGHYNSK ITMNDGVQGV LLHHKTANGL PSLSYAISAQ ATDGVSVSAC
301: PFFIVSGKQD GITAKDMWQA VKENGSFDHL KASEASMQSD HGSSIGAAVA ASVTVLPGES RIVTFSLAWD CPEVQFPSGK IYSRRYTKFY GNNGDAAAQI
401: AHDAILGHSQ WESWIEDWQR PILEDKRLPA WYPVTLFNEL YYLNSGGTLW TDGSSPVHSL AGVREKKFSL DKSQLGLKND IDVPHQNDTA VSVLEKMAST
501: LEELHASTTS NSAFGTKLLE EGEENIGHFL YLEGIEYRMW NTYDVHFYAS FALVMLFPKL ELSIQRDFAA AVMLHDPTKV KTLSEGQWVQ RKVLGAVPHD
601: LGINDPWFEV NGYTLHNTDR WKDLNPKFVL QVYRDVVATG DKKFASAVWP SVYVAMAYMA QFDKDGDGMI ENEGFPDQTY DTWSASGVSA YCGGLWVAAL
701: QAASALARVV GDKNSQDYFW SKFQKAKVVY EKKLWNGSYF NYDNSGSQYS STIQADQLAG QWYARASGLL PIVDEDKART ALEKVYNYNV MKIKDGKRGA
801: VNGMHPNGKV DTASMQSREI WSGVTYALSA TMIQEGLVEM AFQTASGIYE AAWSETGLGY SFQTPESWNT VDEYRSLTYM RPLAIWAMQW ALTKTSQKQE
901: QLGLEPEQQE PELEPSSSMK HDIGFSRVSR LLSLPNEASA KSTLQTLFDY TCRRMMS

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:Q8GUI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.