Factsheet for AT4G10060.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033199.1-P	Field mustard	cytosol	76.57	83.85
CDX94275	Canola	cytosol	76.57	83.85
CDY41128	Canola	cytosol	76.57	83.85
AT1G33700.2	Thale cress	cytosol	73.21	71.28
GSMUA_Achr6P28950_001	Banana	extracellular	25.92	62.73
VIT_18s0001g05700.t01	Wine grape	nucleus	60.63	58.66
PGSC0003DMT400002617	Potato	cytosol	59.22	57.66
GSMUA_Achr6P28940_001	Banana	cytosol	26.79	57.44
AT5G49900.3	Thale cress	cytosol	59.33	57.16
Solyc11g042460.1.1	Tomato	cytosol	58.57	56.84
Os11t0242100-01	Rice	cytosol, plasma membrane	57.27	55.58
GSMUA_Achr9P08230_001	Banana	vacuole	38.83	55.16
TraesCS4A01G226400.1	Wheat	cytosol	56.29	54.46
TraesCS4D01G087100.5	Wheat	cytosol	56.07	54.25
Zm00001d048988_P012	Maize	cytosol	55.75	53.82
KXG28122	Sorghum	cytosol	55.75	53.82
TraesCS4B01G088800.4	Wheat	cytosol	56.07	53.46
HORVU4Hr1G015450.2	Barley	mitochondrion	55.64	50.39
AT3G24180.1	Thale cress	mitochondrion	46.64	45.26

Protein Annotations

KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6-hairpin_glycosidase_sf	InterPro:6hp_glycosidase-like_sf
EntrezGene:826597	ProteinID:AEE82834.1	ProteinID:ANM67377.1	ArrayExpress:AT4G10060	EnsemblPlantsGene:AT4G10060	RefSeq:AT4G10060
TAIR:AT4G10060	RefSeq:AT4G10060-TAIR-G	EnsemblPlants:AT4G10060.2	Unigene:At.21935	InterPro:B_Glucosidase_GBA2-typ	ncoils:Coil
UniProt:F4JLJ2	InterPro:GH116_N	InterPro:GH116_catalytic	GO:GO:0003674	GO:GO:0003824	GO:GO:0004348
GO:GO:0004553	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006629	GO:GO:0006680	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	InterPro:IPR012341	RefSeq:NP_001329211.1	RefSeq:NP_192744.6
PFAM:PF04685	PFAM:PF12215	PIRSF:PIRSF028944	PANTHER:PTHR12654	PANTHER:PTHR12654:SF3	SUPFAM:SSF48208
UniParc:UPI0001A7B0B6	SEG:seg	:	:	:	:

Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:F4JLJ2]

Coordinates

chr4:+:6288827..6295402

Molecular Weight (calculated)

104356.0 Da

IEP (calculated)

6.145

GRAVY (calculated)

-0.428

Length

922 amino acids

Sequence
(BLAST)

001: MEKNGHTESE LQTQMVGNER LPQVTWQRKL NSKVKNPSEF KMSIRDVLHL FPLGYRLWRY TKEEAKKGRF SMYDIFKKRH VRGDHGVPLG GIGGGSIGRS
101: YKGEFQQFKL FPKICEEAPI LTNQFSVFVS RPGGLSYSTV LCPTKPKSVK GKTEDLGIES WDWNMEGDKS TYHALYPRSW TVYNEPDPEL RIVSRQVSPF
201: IPHNYKESSL PVSVFEFTMS NLGKEEATVT LLFTWENSVG GASGLTGEHF NSTIMERDGV HAIVLHHKTG NGHPPVTYAI AAQETEDVHV SECPCFLVSG
301: HSPKEITAKE MWDEIKKNKS FDELNSEPGS PSRPGTSIGA AIAAKVKVPP GCDRTVTFSL SWDCPEVRFN EKTYHRRYTK FYGNLGDAAV KMARDALLNY
401: VDWESQIEAW QSPILSDTTL PDWYRVTLFN ELYYFNSGGT IWTDGLPPKE SIERSKVTNT EQNDIVIDLF QKINAVCEQI YSPQSSNSEE NIGQFIYLEG
501: IEYLMYNTYD VHFYSSFALL SLFPKLALSI QRDFAATVLI QDPTKKKIMS SGEWVTRKLL GSVPHDIGLN DPWLELNEYN FFNTDRWKDL NAKFVLQVYR
601: DVVATNDQSF AKAVWPSVYT AVAYLDQFDK DEDGMIENEG FPDQTYDAWS VTGVSAYCGG LWVAALQAAS AFASIVGENA VAIYFNAKYE KAKIVYEKLW
701: NGSYFNYDDS GSGSSSSILA DQLAGQWYAR ACGLKPITKE EWIKKALETI YEFNVMKVKG GTRGAVNGMS TEGKVDTNSL VSKEVWAGTT YSVAACMIQE
801: GQREKGFQTA SGIYEAIWSD RGLSCSFQTP EAWNMNDEYR SLCYMRPLAI WAIQWALTRT QSFGEEKQKL VAGDEEEESN LLLRQHKGFK DVARFVKIVP
901: TSNVHRSRLQ HTYETVLKTL RL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.