Factsheet for PGSC0003DMT400063999

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P28940_001	Banana	cytosol	56.48	42.56
Solyc01g103230.2.1	Tomato	cytosol	91.98	31.24
VIT_12s0035g01220.t01	Wine grape	cytosol	63.27	21.6
AT5G49900.3	Thale cress	cytosol	63.27	21.42
CDX83178	Canola	cytosol	60.8	20.67
CDY21445	Canola	cytosol	60.49	20.55
KRH51297	Soybean	cytosol	58.33	20.3
TraesCS4A01G226400.1	Wheat	cytosol	57.1	19.41
TraesCS4D01G087100.5	Wheat	cytosol	56.79	19.31
Bra000598.1-P	Field mustard	cytosol	54.63	19.28
Os11t0242100-01	Rice	cytosol, plasma membrane	56.17	19.16
PGSC0003DMT400002617	Potato	cytosol	55.86	19.11
Zm00001d048988_P012	Maize	cytosol	55.56	18.85
KXG28122	Sorghum	cytosol	55.25	18.74
TraesCS4B01G088800.4	Wheat	cytosol	55.56	18.61
HORVU4Hr1G015450.2	Barley	mitochondrion	56.79	18.07
GSMUA_Achr9P08230_001	Banana	vacuole	1.54	0.77
PGSC0003DMT400076302	Potato	cytosol, nucleus, peroxisome, plastid	0.62	0.33
PGSC0003DMT400064004	Potato	cytosol, nucleus, plastid	0.62	0.33
GSMUA_Achr6P28950_001	Banana	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400063999	EnsemblPlantsGene:PGSC0003DMG401024877	InterPro:GH116_N	KEGG:00511+3.2.1.45	KEGG:00600+3.2.1.45	PANTHER:PTHR12654
PANTHER:PTHR12654:SF3	PFAM:PF12215	PGSC:PGSC0003DMG401024877	UniParc:UPI0002958125	UniProt:M1CBK1	MapMan:50.3.2

Description

Non-lysosomal glucosylceramidase [Source:PGSC_GENE;Acc:PGSC0003DMG401024877]

Coordinates

chr1:+:79971295..79978714

Molecular Weight (calculated)

35884.6 Da

IEP (calculated)

6.923

GRAVY (calculated)

-0.240

Length

324 amino acids

Sequence
(BLAST)

001: MLINGSNKGE GECCKDREVT VDPAKLPSLT WQRKLNCDDI SLSEFNLMLK EMVTLAPLGF RLWKYLQEEK AKGKDALFIN PFIKRVYSSC QGVPIGGMGA
101: GSIGRSFKGE FLRWQIFPRI CEDKPVLANQ FSIFVTRPNG EKYSTVLCPR TPNDSSASGI GSWDWNLGGQ NSTYHGLYPR AWTVYDGEPD PALRIVCRQI
201: SPFIPHNYKE SSLPTSVFTF TLHNLGNTSA DVTLLFTWAN SAGGDSGISG HHFNSKFRTE DGVQGVLLHH MTSKELPSVT FAIAAEENDA VHVSECPFFV
301: ISGDSQGITA KDMWNEVKKV FAIA

Best Arabidopsis Sequence Match ( AT1G33700.4 )
(BLAST)

001: MQNVPEDQNK MVIDDKLPPF SWERKLNSQA KTPSEFKLSK RDHMHLFPLG YRLWRHTKDE AAKGRASIFD IFRKHHITGD HGVPLGGIGS GSIGRSYKGE
101: FQQFKLFPKI CEEAPILTNQ FSAFVSRPGG VKHSTVLCPS KPQVVKDNGG YLCQGQAPNM GIESWDWNMT GEKSTYHALY PRSWTVYDGE PDPELRIVSR
201: QVSPFIPHNY EESSLPVSVF NFTVTNTGAE PAIVTLLFTW ENSVGGASGL TGQHFNSTMK AKDGVHAVAL QHKTANGHPP VSYAIAAKET EDVRVSSCPC
301: FIVSGTTPNQ ITAGDMWDEI KKNASFDKLT SNACSPSKPG TSIGAAIAAK VKVPPGCDRT VTFSLSWDCP EARFDEKTYH RRYTRFYGSL GNAAVAMAHD
401: ALLNFPEWET QIEEWQAPVL ADTTLPEWYR VTLFNELYYF NSGGTMWTDG LPPKQSLDSI GRRKISLGLS TIDKNDQDQN NVALDILGRI DAVCSQIHAP
501: LTSNAALGNT MIQNTTENIG QFLYLEGVQY LMYNTYDVHF YSSFALLMLF PKIELSIQRD FAAAVLMHDS SKKQVMSSGE FVTRKVLGAV PHDIGLNDPW
601: FELNAYNLFN TDRWKDLNSK FVLQVYRDVV ATGDLNFAKA VWPSVYTAIA YLDQFDKDGD GMIENEGFPD QTYDAWSCSG VSAYCGGLWV AALQAGSALA
701: REIGDNGAAV YFNAKYEKAR SVYEKLWNGS YFNYDNSRSG SSSSILADQM AGQWYARACG LKPIAKEEWI KKALETVYDF NVMRVRDGTR GAVNGMLPDG
801: RVDTSTMVSR EVWAGTTYSV AACMIQEGLA DKGFRTASGI YEAAWSDRGL G

Arabidopsis Description

Non-lysosomal glucosylceramidase [Source:UniProtKB/TrEMBL;Acc:A0A178WEQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.