CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24707	Soybean	mitochondrion	61.11	20.95
GSMUA_Achr1P22830_001	Banana	mitochondrion	55.56	14.85
KRH29712	Soybean	mitochondrion	62.96	13.55
PGSC0003DMT400009817	Potato	plastid	59.26	13.25
Solyc09g074100.2.1	Tomato	plastid	59.26	13.22
Bra030447.1-P	Field mustard	plastid	56.48	12.82
AT1G51310.1	Thale cress	plastid	57.41	12.47
TraesCS4D01G289400.1	Wheat	mitochondrion	55.56	12.37
TraesCS4B01G290300.1	Wheat	mitochondrion	55.56	12.37
Bra014273.1-P	Field mustard	plastid	55.56	12.35
TraesCS4A01G013400.2	Wheat	mitochondrion	55.56	12.24
CDY65470	Canola	plastid	55.56	12.24
HORVU4Hr1G075740.9	Barley	mitochondrion	54.63	12.04
CDY03630	Canola	plastid	54.63	11.99
EER95411	Sorghum	mitochondrion	53.7	11.86
Zm00001d027872_P001	Maize	mitochondrion	53.7	11.86
Os03t0174600-01	Rice	mitochondrion	52.78	11.68
VIT_06s0004g02080.t01	Wine grape	plastid	58.33	11.67
CDY29626	Canola	plastid	54.63	11.52
CDY35562	Canola	plastid	46.3	10.94
CDY03633	Canola	cytosol	7.41	4.47
CDY03632	Canola	cytosol	2.78	2.38

Protein Annotations

EMBL:ACUP02005859	EnsemblPlants:KRH38623	EnsemblPlantsGene:GLYMA_09G147800	Gene3D:3.40.50.620	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold
PANTHER:PTHR43052	PFAM:PF03054	ProteinID:KRH38623	ProteinID:KRH38623.1	SignalP:SignalP-TM	SUPFAM:SSF52402
UniParc:UPI000296AFC9	UniProt:K7LE02	MapMan:16.12.3.1.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:36578491..36579599

Molecular Weight (calculated)

12678.2 Da

IEP (calculated)

6.215

GRAVY (calculated)

0.088

Length

108 amino acids

Sequence
(BLAST)

001: MMKFQHPQLV TSLFLVHPAS TEASIAALWL LHAVGHSCTA FYLKILFQNF WSECPWEDDL KYAKDVCNQV DVPLEVVHLT DEYWNNVVRK TDSATFVQYF
101: IHFPFIRQ

Best Arabidopsis Sequence Match ( AT1G51310.1 )
(BLAST)

001: MFSAVAKPFL SPSPPLFRLP LSSISISFRV FPSFFSSSSS SQLPSPQSSN PITPLISSNR NYSRHAFIVD QYLSCSMPEK PLRVAVLLSG GVDSSVALRL
101: LHAAGHSCTA FYLKIWFQEG FENFWNQCPW EDDLKYAKHV CEQVDVPLEV VHLTDEYWER VVSYIIEEYR CGRTPNPDVL CNTRIKFGAF MDAISDMEYD
201: YVGSGHYAKV VHPPADQNDA SSVLELSQDM VKDQTYFLSH LSQTQLKRLL FPLGCVKKDE VRKLATQFDL PNKDRKDSQG ICFLGKIKFS DFVCRHIGEM
301: EGIILEAESG DFLGNHRGFW FYTIGQRQGL RLPGGPWYVV EKDTKNNVVF VSRNYYSIDK RRRIFRVGSL RWNSGKPSGK VRELRCKVRH GPGFYSCSFE
401: MEGDGDVAVV HLDEDDQGLA AGQFAAFYEG TTCIGSGVIL ESWDDQCFPV CAKALQLAAL EDKTKLGKPV KIMTMPTMSS VEADTGEASA EQKLVNA

Arabidopsis Description

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I824]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.